DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and Slc16a3

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001033742.1 Gene:Slc16a3 / 80879 MGIID:1933438 Length:470 Species:Mus musculus


Alignment Length:649 Identity:127/649 - (19%)
Similarity:211/649 - (32%) Gaps:242/649 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLY 105
            |:....:..|||||||.||.|..:.........|:..|.|.|....|....:..|||.::...:.
Mouse     7 DEGPTGIKAPDGGWGWAVLFGCFIITGFSYAFPKAVSVFFKELMHEFGIGYSDTAWISSILLAML 71

  Fly   106 SSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYI 170
            ...||:.|:...::..|.|.|:||..|||||:.:.:..||..:|::.||:.|:|..|:|.|::.:
Mouse    72 YGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQIYLTTGVITGLGLALNFQPSLIM 136

  Fly   171 VTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVE 235
            :..||.|.|.:||||..:||.:....|.||.:.|.:.||:.|..||:||:.||..|.|....|: 
Mouse   137 LNRYFNKRRPIANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLLNCCVCAALMRPL- 200

  Fly   236 QHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQF 300
                                                                             
Mouse   201 ----------------------------------------------------------------- 200

  Fly   301 VRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTL 365
                                                                             
Mouse   201 ----------------------------------------------------------------- 200

  Fly   366 RNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYA 430
                                |:....|.|                                    
Mouse   201 --------------------VAPQVGGGT------------------------------------ 209

  Fly   431 DVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYL 495
              :.||..:.|||  ..|||:.:|..:|:..::.|...:......:.:.|:.:..|...:.:|:|
Mouse   210 --EPRGPQRPPQR--LLDLSVFRDRGFLIYAVAASIMVLGLFVPPVFVVSYAKDMGVPDTKAAFL 270

  Fly   496 LSVVSATDLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAW--------------TYS 546
            |:::...|:..|            |...:..|...:...|:.|..||.              .|.
Mouse   271 LTILGFIDIFAR------------PTAGFITGLKKVRPYSVYLFSFAMFFNGFTDLTGSTATDYG 323

  Fly   547 SVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDY 611
            .:..:|..||::.|:...:...::..::||::.:|:.|:.|.:..:..|:|||......:|...|
Mouse   324 GLVVFCIFFGISYGMVGALQFEVLMAIVGTQKFSSAIGLVLLLEAVAVLIGPPSGGKLLDATKVY 388

  Fly   612 NPLFHALGLTLLAGAS---------LWSFMPWINRRK---------ANAEEQLDAQIEKAAVDS 657
            ..:|      :||||.         |.:|. .|.:||         ..:||:|........|||
Mouse   389 KYVF------ILAGAEVLTSSLVLLLGNFF-CIGKRKRPEVTEPEEVASEEKLHKPPVDVGVDS 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 123/635 (19%)
MFS 59..>234 CDD:119392 58/174 (33%)
MFS <449..633 CDD:119392 41/206 (20%)
Slc16a3NP_001033742.1 MFS_MCT3_4 21..410 CDD:340988 111/597 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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