DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and Slc16a3

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_109621.1 Gene:Slc16a3 / 80879 MGIID:1933438 Length:470 Species:Mus musculus


Alignment Length:649 Identity:127/649 - (19%)
Similarity:211/649 - (32%) Gaps:242/649 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLY 105
            |:....:..|||||||.||.|..:.........|:..|.|.|....|....:..|||.::...:.
Mouse     7 DEGPTGIKAPDGGWGWAVLFGCFIITGFSYAFPKAVSVFFKELMHEFGIGYSDTAWISSILLAML 71

  Fly   106 SSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYI 170
            ...||:.|:...::..|.|.|:||..|||||:.:.:..||..:|::.||:.|:|..|:|.|::.:
Mouse    72 YGTGPLCSVCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQIYLTTGVITGLGLALNFQPSLIM 136

  Fly   171 VTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVE 235
            :..||.|.|.:||||..:||.:....|.||.:.|.:.||:.|..||:||:.||..|.|....|: 
Mouse   137 LNRYFNKRRPIANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLLNCCVCAALMRPL- 200

  Fly   236 QHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQF 300
                                                                             
Mouse   201 ----------------------------------------------------------------- 200

  Fly   301 VRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTL 365
                                                                             
Mouse   201 ----------------------------------------------------------------- 200

  Fly   366 RNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYA 430
                                |:....|.|                                    
Mouse   201 --------------------VAPQVGGGT------------------------------------ 209

  Fly   431 DVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYL 495
              :.||..:.|||  ..|||:.:|..:|:..::.|...:......:.:.|:.:..|...:.:|:|
Mouse   210 --EPRGPQRPPQR--LLDLSVFRDRGFLIYAVAASIMVLGLFVPPVFVVSYAKDMGVPDTKAAFL 270

  Fly   496 LSVVSATDLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAW--------------TYS 546
            |:::...|:..|            |...:..|...:...|:.|..||.              .|.
Mouse   271 LTILGFIDIFAR------------PTAGFITGLKKVRPYSVYLFSFAMFFNGFTDLTGSTATDYG 323

  Fly   547 SVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDY 611
            .:..:|..||::.|:...:...::..::||::.:|:.|:.|.:..:..|:|||......:|...|
Mouse   324 GLVVFCIFFGISYGMVGALQFEVLMAIVGTQKFSSAIGLVLLLEAVAVLIGPPSGGKLLDATKVY 388

  Fly   612 NPLFHALGLTLLAGAS---------LWSFMPWINRRK---------ANAEEQLDAQIEKAAVDS 657
            ..:|      :||||.         |.:|. .|.:||         ..:||:|........|||
Mouse   389 KYVF------ILAGAEVLTSSLVLLLGNFF-CIGKRKRPEVTEPEEVASEEKLHKPPVDVGVDS 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 61/175 (35%)
MFS <451..633 CDD:475125 39/204 (19%)
Slc16a3NP_109621.1 MFS_MCT3_4 21..410 CDD:340988 111/597 (19%)
Basolateral sorting signal. /evidence=ECO:0000250|UniProtKB:O15427 429..446 6/17 (35%)
Basolateral sorting signal. /evidence=ECO:0000250|UniProtKB:O15427 446..470 127/649 (20%)

Return to query results.
Submit another query.