DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and Slc16a3

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_110461.1 Gene:Slc16a3 / 80878 RGDID:620603 Length:471 Species:Rattus norvegicus


Alignment Length:658 Identity:129/658 - (19%)
Similarity:216/658 - (32%) Gaps:252/658 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLY 105
            |:....:..|||||||.||.|..:.........|:..|.|.|....|....:..|||.::...:.
  Rat     7 DEGPTGIKAPDGGWGWAVLFGCFIITGFSYAFPKAVSVFFKELMHEFGIGYSDTAWISSILLAML 71

  Fly   106 SSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYI 170
            ...||:.|:...::..|.|.|:||..|||||:.:.:..||..:|::.||:.|:|..|:|.|::.:
  Rat    72 YGTGPLCSMCVNRFGCRPVMLVGGLFASLGMVAASFCRSIIQIYLTTGVITGLGLALNFQPSLIM 136

  Fly   171 VTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVE 235
            :..||.|.|.:||||..:||.:....|.||.:.|.:.||:.|..||:||:.||..|.|....   
  Rat   137 LNRYFNKRRPMANGLAAAGSPVFLCALSPLGQLLQDHYGWRGGFLILGGLLLNCCVCAALMR--- 198

  Fly   236 QHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQF 300
                                                                 ||..|       
  Rat   199 -----------------------------------------------------PLVAP------- 203

  Fly   301 VRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTL 365
                                                          |:|..|.|.|         
  Rat   204 ----------------------------------------------QASGGAEPHG--------- 213

  Fly   366 RNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYA 430
                                                                             
  Rat   214 ----------------------------------------------------------------- 213

  Fly   431 DVDARGQAQQPQR--SKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSA 493
                      |||  .:..|||:.:|..:|:..::.|...:......:.:.|:.:..|...:.:|
  Rat   214 ----------PQRPSPRLLDLSVFRDRGFLIYAVAASIMVLGLFVPPVFVVSYAKDMGVPDTKAA 268

  Fly   494 YLLSVVSATDLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAW--------------T 544
            :||:::...|:..|            |...:..|...:...|:.|..||.              .
  Rat   269 FLLTILGFIDIFAR------------PTAGFITGLKKVRPYSVYLFSFAMFFNGFTDLTGSTASD 321

  Fly   545 YSSVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVN 609
            |..:..:|..||::.|:...:...::..::||::.:|:.|:.|.:..:..|:|||......:|..
  Rat   322 YGGLVVFCIFFGISYGMVGALQFEVLMAIVGTQKFSSAIGLVLLLEAVAVLIGPPSGGKLLDATK 386

  Fly   610 DYNPLFHALGLTLLAGAS---------LWSFMPWINRRK----------ANAEEQL-----DAQI 650
            .|..:|      :||||.         |.:|. .|.:||          |:.||:|     |.::
  Rat   387 VYKYVF------ILAGAEVLTSSLVLLLGNFF-CIGKRKRPEVTKPEEVASEEEKLHKPPVDVRV 444

  Fly   651 EKAAVDSY 658
            :...|:.:
  Rat   445 DSREVEHF 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 127/643 (20%)
MFS 59..>234 CDD:119392 58/174 (33%)
MFS <449..633 CDD:119392 41/206 (20%)
Slc16a3NP_110461.1 MFS_MCT3_4 21..410 CDD:340988 113/599 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5173
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.920

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