DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and slc16a5b

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:XP_001919658.1 Gene:slc16a5b / 794371 ZFINID:ZDB-GENE-131120-181 Length:547 Species:Danio rerio


Alignment Length:664 Identity:132/664 - (19%)
Similarity:240/664 - (36%) Gaps:214/664 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 HKPNGNTNESRHK-----------TVSLINKKDDKEYD----------------------LVPPD 51
            |:|..||..:|.:           |.|..:::.|:|.:                      .:.||
Zfish     8 HQPQPNTTVTRSRASSLQAFENADTASCKSEEPDQEEEEEQSSSTLPEERHCSTGGQANAQLAPD 72

  Fly    52 GGWGWLVLLGSCLT---NILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSS 113
            |||||:|:..:.|.   .:..|..|   |:.::|....|.:|.|:.:|:||:...:..:.||:.|
Zfish    73 GGWGWVVVAATILVLAMTLAFPSCI---GIFYTELQSDFQASNTETSWVPAIMMAVLHACGPICS 134

  Fly   114 ILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKL 178
            :|..:...|...::||..:.|||..|.:|.::..|||:.|::.|:|..|.|.|::.:|..||.:.
Zfish   135 VLVERCGCRATIIIGGILSGLGMAASSFAQTMVELYITAGIITGMGFSLCFQPSITMVGHYFVRR 199

  Fly   179 RGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPR 243
            |..||.|..:|:|||..|||.|..:||..:|:.||.|::||:.||..|.                
Zfish   200 RAFANALSSTGTALGLSILPLLANYLLRNFGWRGSFLVLGGVLLNCCVC---------------- 248

  Fly   244 ARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAV 308
                          |.||:                          ||             |:...
Zfish   249 --------------GAVMR--------------------------PL-------------AAKPK 260

  Fly   309 VQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRL 373
            .::.:|..|....:                                     :|.|::....|.||
Zfish   261 TETRTKETDNHHLK-------------------------------------TNCLSVHQGLKGRL 288

  Fly   374 SKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQA 438
            .....:..:||                                                      
Zfish   289 RATLSTIMTFL------------------------------------------------------ 299

  Fly   439 QQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATD 503
               :|...||| |..:|.:....:..|...:.:...::.|..:..|.|..:..:|.|::::...:
Zfish   300 ---RRHMAFDL-LCSNPYFCAYALGVSWMMLGFVVPLVYLVPYATAYGMEQDQAALLMAILGLIN 360

  Fly   504 LIGRIGGSALSDMGYIPK-------TWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGI 561
            :|.|   .|.:.:..:|:       .:.|...:.|:|||..:.....::..:..:..|||.:..:
Zfish   361 IIVR---PATAIVFGLPRFRGSHNFAYLFAIAVVINGLSNCVCGIGTSFLVLLVYVILFGFSMSL 422

  Fly   562 YVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLT-LLAG 625
            ...:...::.|.:...|..|:.|:...:..::.|:||||.....::...|..:|.|..:| ..||
Zfish   423 VGSLLFTVLMDTVEMSRFPSALGLISIMESIMLLLGPPLAGILVDSTGQYIYVFFACSVTGSTAG 487

  Fly   626 ASLWSFMPWINRRK 639
            ..:.....|::||:
Zfish   488 LFIMLSFYWLDRRR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 123/602 (20%)
MFS 59..>234 CDD:119392 58/177 (33%)
MFS <449..633 CDD:119392 36/191 (19%)
slc16a5bXP_001919658.1 2A0111 71..511 CDD:331689 123/601 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.020

Return to query results.
Submit another query.