DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and Slc16a13

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_758959.1 Gene:Slc16a13 / 69309 MGIID:1916559 Length:428 Species:Mus musculus


Alignment Length:585 Identity:125/585 - (21%)
Similarity:212/585 - (36%) Gaps:199/585 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSS 113
            ||||||||:|:|.:...:.|:.|.::||||.|.||..||.....:.:||.::...:.....|:.|
Mouse     7 PPDGGWGWMVVLSAFFQSALVFGVLRSFGVFFVEFVAAFEEQAARVSWIASIGIAVQQFGSPIGS 71

  Fly   114 ILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKL 178
            .||.|...|.|.:.||..|:|||:|:.:|:|:..||:|.|:|.|.|..|:|.||:..::.||::.
Mouse    72 ALSTKLGPRPVVMTGGILAALGMLLASFATSLTHLYLSIGLLSGSGWALTFTPTMACLSRYFSQR 136

  Fly   179 RGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPR 243
            |.||.||.::|..:.|....||.:||:..|.:.|:.|::..::|::........|:         
Mouse   137 RSLAMGLALTGVGISSFAFAPLFQWLINNYAWRGALLLVSALSLHLMACGALLRPL--------- 192

  Fly   244 ARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAV 308
                  ::.|:..:|                                 .||.:....:|      
Mouse   193 ------SLTEDAAVG---------------------------------GPGAQITSLLR------ 212

  Fly   309 VQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRL 373
                                                                             
Mouse   213 ----------------------------------------------------------------- 212

  Fly   374 SKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQA 438
                             ||..|     .:::.|:|.:.|                          
Mouse   213 -----------------HGPFL-----RYTAALTLINTG-------------------------- 229

  Fly   439 QQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATD 503
                   ||                     |.|.:.:..|...    |::...:|:||||.:.:|
Mouse   230 -------FF---------------------IPYVHLVAHLQDL----GWDPLPAAFLLSVAAVSD 262

  Fly   504 LIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITAV 568
            |:||:....|.|....|.....:...:::|:||||.|.|...|::......:|..||....:...
Mouse   263 LVGRVASGWLGDAVPGPVARLLMLWTTLTGVSLALFPVAQASSTLVVLAVAYGFTSGALTPVAFS 327

  Fly   569 IMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGASLWSFMP 633
            ::.:::||.|:....|:...:..:..|:|.||..|..:...:|...|...|..||||:.:...:|
Mouse   328 VLPELVGTGRIYCGMGLVQMIESIGGLLGAPLSGYLRDVTGNYTASFVVAGAFLLAGSGVLLTLP 392

  Fly   634  633
            Mouse   393  392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 125/585 (21%)
MFS 59..>234 CDD:119392 58/174 (33%)
MFS <449..633 CDD:119392 43/183 (23%)
Slc16a13NP_758959.1 MFS 14..392 CDD:119392 117/576 (20%)
2A0111 14..383 CDD:273323 114/567 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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