DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and Slc16a8

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_113932.2 Gene:Slc16a8 / 65200 RGDID:69282 Length:490 Species:Rattus norvegicus


Alignment Length:584 Identity:131/584 - (22%)
Similarity:213/584 - (36%) Gaps:202/584 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSC--LTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPV 111
            |||||||| |:||:|  :|.... |..|:..|.|.|....|.:..:..||:.::...:....||:
  Rat    12 PPDGGWGW-VVLGACFVITGFAY-GFPKAVSVFFRELKRDFGAGYSDTAWVSSIMLAMLYGTGPL 74

  Fly   112 SSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFA 176
            ||||..::..|.|.|.||..||.||||:.:||.:..||::.|||.|:|..|:|.|::.::..||.
  Rat    75 SSILVTRFGCRPVMLAGGLLASAGMILASFASRLLELYLTAGVLTGLGLALNFQPSLIMLGLYFE 139

  Fly   177 KLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRV 241
            :.|.|||||..:||.:....|.||.:.|.|.:|:.|..|:.||:.|:....              
  Rat   140 RRRPLANGLAAAGSPVFLSTLSPLGQLLGERFGWRGGFLLFGGLLLHCCAC-------------- 190

  Fly   242 PRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASA 306
                            |.||:      |.|..:|...|                           
  Rat   191 ----------------GAVMR------PPPGPQPRPDP--------------------------- 206

  Fly   307 AVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKS 371
                                                         |.|.||:...:|        
  Rat   207 ---------------------------------------------APPGGRARHRQL-------- 218

  Fly   372 RLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARG 436
                                                                             
  Rat   219 ----------------------------------------------------------------- 218

  Fly   437 QAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSA 501
                      .||::..|..::|.:::....|:......|||.::.:..|...:.:|:|||:|..
  Rat   219 ----------LDLAVCTDRTFMVYMVTKFLMALGLFVPAILLVNYAKDAGVPDAEAAFLLSIVGF 273

  Fly   502 TDLIGRIGGSALSDMG----YIPKTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIY 562
            .|::.|....||:.:|    ::|  :.|...|..:||:..:...|.:|.::..:|..|||:.|:.
  Rat   274 VDIVARPACGALAGLGRLRPHVP--YLFSLALLANGLTDLISARARSYGTLVAFCIAFGLSYGMV 336

  Fly   563 VGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGL-TLLAG 625
            ..:...::...:|..|..|:.|:.|.|..:..|:|||......:|:.:|..:|:..|. .:|||
  Rat   337 GALQFEVLMATVGAPRFPSALGLVLLVEAVAVLIGPPSAGRLVDALKNYEIIFYLAGSEVVLAG 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 65/177 (37%)
MFS <451..633 CDD:475125 46/180 (26%)
Slc16a8NP_113932.2 2A0113 14..440 CDD:273325 129/582 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..490
Basolateral sorting signal. /evidence=ECO:0000250|UniProtKB:O95907 426..460
Basolateral sorting signal. /evidence=ECO:0000250|UniProtKB:O95907 461..480
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.