DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and zgc:114041

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001025143.1 Gene:zgc:114041 / 574425 ZFINID:ZDB-GENE-050706-122 Length:433 Species:Danio rerio


Alignment Length:606 Identity:130/606 - (21%)
Similarity:224/606 - (36%) Gaps:194/606 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFN--SSPTKAAWIPALCYFLYSS 107
            |...|||||:||:|:..:.....|....:|:||:.|.|..:.::  :|.|.......:..|...|
Zfish     4 YSRDPPDGGYGWVVVASAFFIMGLTAAVLKNFGLFFLELQNYYSVLTSTTSLMTSTTIAVFHLGS 68

  Fly   108 LGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVT 172
              |::|.||:..|.|.|.::||..|:.|||::....|:.::|:|.||:.|:|...::.|...:|.
Zfish    69 --PLASALSMHLSQRPVIMVGGLLAASGMIIASLGLSLPWMYLSVGVIQGLGVSFTWVPANSMVN 131

  Fly   173 SYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQH 237
            .||.:.|.:|..:..||..:..:...|..:||:|:|.:.|:.|::||:.||:.|.          
Zfish   132 HYFKRWRPIACAISSSGECVFGMAFSPFFQWLIESYSWRGALLVIGGLQLNLIVC---------- 186

  Fly   238 MVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVR 302
                                |.:|                |||.|                  |:
Zfish   187 --------------------GALM----------------KPLQP------------------VQ 197

  Fly   303 SASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRN 367
            ::..||:.|...:|     .|:|:           ||       |.||...||            
Zfish   198 TSRKAVLDSKEGTG-----TSKKV-----------TF-------QCSLIQRPE------------ 227

  Fly   368 SSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADV 432
                          ..||:......:...|.|                                 
Zfish   228 --------------LLLYIVFAIFAAAGFFIP--------------------------------- 245

  Fly   433 DARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLS 497
                                  |::||..::|                    .|.::..:|.|||
Zfish   246 ----------------------PLFLVPYVNN--------------------LGMDQYWAASLLS 268

  Fly   498 VVSATDLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIY 562
            |:|..||:||:|...|:::..:..........:..|:.|.|||.|:.|.||..:.:|:|...|..
Zfish   269 VLSLADLLGRLGCGWLANLCLLRNLQLLTMVATAMGVVLLLLPIAYGYWSVLVFTSLYGFLFGCV 333

  Fly   563 VGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGAS 627
            |.|....:.|::|.|...|:.|:.:.:..:...:|||...:..:..:::...|:..|:.||....
Zfish   334 VAIHVTSIVDIVGLEGFDSALGLFMLLRSIGGFLGPPAAGWLVDWTHNFGAAFYLSGICLLLSGC 398

  Fly   628 LWSFMPWI--NRRKANAEEQL 646
            ....:.|:  .::|...:|.|
Zfish   399 FVVLVDWLVEKKKKKKLQETL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 129/602 (21%)
MFS 59..>234 CDD:119392 50/176 (28%)
MFS <449..633 CDD:119392 43/183 (23%)
zgc:114041NP_001025143.1 2A0111 15..396 CDD:273323 119/570 (21%)
MFS 18..403 CDD:119392 117/574 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5252
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.820

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