DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and slc16a4

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001074068.2 Gene:slc16a4 / 567144 ZFINID:ZDB-GENE-070112-602 Length:558 Species:Danio rerio


Alignment Length:643 Identity:158/643 - (24%)
Similarity:278/643 - (43%) Gaps:124/643 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KDHKPNGNT-----NESRHKTVSLINKKDDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFG 77
            |:...:|.|     :|.:.|   ::.|:..|.....||||||||:|:|...|.|:|:.||:|:||
Zfish     4 KEQHSDGKTAKTPCSELKAK---VMKKEKKKVVYREPPDGGWGWMVVLHCFLVNVLVMGTLKTFG 65

  Fly    78 VLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWA 142
            :.|....|.|..|....:||.::...|..|.||::|:...|...|..:::|....|.|.:.|.:|
Zfish    66 IFFVALQDEFGGSSESISWIGSIMSSLRLSGGPLASVACAKLGNRVTSIVGALFVSAGFLFSIFA 130

  Fly   143 SSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLRGLANGLCISGSALG-SIILPPLLRWLLE 206
            :|:.:||||.|::||:|..|.:..|..::.:||.|  .||....|..|.:| :..|.|..:.||:
Zfish   131 TSVTYLYISMGLVVGLGFALLYQATSVVIVTYFRK--RLATAYSIGRSGMGLTFALAPFTQLLLD 193

  Fly   207 TYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVP 271
            .|.:.|:.||:||:.||:..:.:...|:.   :|.|.:..:...|.:.|           .:|:.
Zfish   194 QYAWQGALLILGGLMLNLVASGMLLRPIN---IRHPASPISNSTIHKTE-----------KDPLK 244

  Fly   272 KNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRN 336
            .|...:.|                            |....|||..         |.|:   .::
Zfish   245 NNMNGNTP----------------------------VANGTSKSDS---------SPPI---HKD 269

  Fly   337 QTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKE 401
            .......::.|:||..:...:.:.|.:   |.:.|..:|.||..:....|               
Zfish   270 TLIIKNPVHEQNSLPHLDLKKPTQNGV---NGTDSSQTKTSPEMNGVSPV--------------- 316

  Fly   402 FSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQAQQPQRS-KFFDLSLLKDPMYLVILISNS 465
                               ||..::|...:|        |:.| |..|.||||:|.:.:.     
Zfish   317 -------------------DSLLENGRTENV--------PENSPKVLDFSLLKNPFFCIY----- 349

  Fly   466 TNAISYTNFIILLPSF---GEAR--GFNKSLSAYLLSVVSATDLIGRIGGSALSDMGYIPKTWYF 525
            |.::.::.....:|.|   ..||  |.:...:::::||...|:.:.::....::|...:.|..|.
Zfish   350 TWSLVFSQLAYFIPYFHLSARARNLGIDPMDASFIISVAGITETVAQLASGWVTDRNLVHKYHYH 414

  Fly   526 VGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVN 590
            ...|.:.|:...|.|.|.:|..:..:...|.:..|.|:.:...::.|::|.::|.:|.|.|:|..
Zfish   415 KAYLILCGVVNLLSPLATSYILLMVYAVFFAIFCGGYMALLLPVLVDLVGADKLNNSMGFSMFFV 479

  Fly   591 GLLQLVGPPLCNYWFEAVNDYNPLFHALGLT-LLAGASLWSFMPWINRRKANAEEQLD 647
            ||..|.||||..:.::....|:..|:..|:. ||:..||  |:..:.||....:|:|:
Zfish   480 GLGCLTGPPLAGFLYDYTQTYDCSFYLAGVCYLLSSISL--FLEPLARRWQARKERLE 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 151/607 (25%)
MFS 59..>234 CDD:119392 58/175 (33%)
MFS <449..633 CDD:119392 48/189 (25%)
slc16a4NP_001074068.2 2A0113 35..520 CDD:273325 146/592 (25%)
MFS 47..520 CDD:119392 137/580 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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