DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and slc16a4

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001074068.2 Gene:slc16a4 / 567144 ZFINID:ZDB-GENE-070112-602 Length:558 Species:Danio rerio


Alignment Length:643 Identity:158/643 - (24%)
Similarity:278/643 - (43%) Gaps:124/643 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KDHKPNGNT-----NESRHKTVSLINKKDDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFG 77
            |:...:|.|     :|.:.|   ::.|:..|.....||||||||:|:|...|.|:|:.||:|:||
Zfish     4 KEQHSDGKTAKTPCSELKAK---VMKKEKKKVVYREPPDGGWGWMVVLHCFLVNVLVMGTLKTFG 65

  Fly    78 VLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWA 142
            :.|....|.|..|....:||.::...|..|.||::|:...|...|..:::|....|.|.:.|.:|
Zfish    66 IFFVALQDEFGGSSESISWIGSIMSSLRLSGGPLASVACAKLGNRVTSIVGALFVSAGFLFSIFA 130

  Fly   143 SSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLRGLANGLCISGSALG-SIILPPLLRWLLE 206
            :|:.:||||.|::||:|..|.:..|..::.:||.|  .||....|..|.:| :..|.|..:.||:
Zfish   131 TSVTYLYISMGLVVGLGFALLYQATSVVIVTYFRK--RLATAYSIGRSGMGLTFALAPFTQLLLD 193

  Fly   207 TYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVP 271
            .|.:.|:.||:||:.||:..:.:...|:.   :|.|.:..:...|.:.|           .:|:.
Zfish   194 QYAWQGALLILGGLMLNLVASGMLLRPIN---IRHPASPISNSTIHKTE-----------KDPLK 244

  Fly   272 KNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRN 336
            .|...:.|                            |....|||..         |.|:   .::
Zfish   245 NNMNGNTP----------------------------VANGTSKSDS---------SPPI---HKD 269

  Fly   337 QTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKE 401
            .......::.|:||..:...:.:.|.:   |.:.|..:|.||..:....|               
Zfish   270 TLIIKNPVHEQNSLPHLDLKKPTQNGV---NGTDSSQTKTSPEMNGVSPV--------------- 316

  Fly   402 FSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQAQQPQRS-KFFDLSLLKDPMYLVILISNS 465
                               ||..::|...:|        |:.| |..|.||||:|.:.:.     
Zfish   317 -------------------DSLLENGRTENV--------PENSPKVLDFSLLKNPFFCIY----- 349

  Fly   466 TNAISYTNFIILLPSF---GEAR--GFNKSLSAYLLSVVSATDLIGRIGGSALSDMGYIPKTWYF 525
            |.::.::.....:|.|   ..||  |.:...:::::||...|:.:.::....::|...:.|..|.
Zfish   350 TWSLVFSQLAYFIPYFHLSARARNLGIDPMDASFIISVAGITETVAQLASGWVTDRNLVHKYHYH 414

  Fly   526 VGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVN 590
            ...|.:.|:...|.|.|.:|..:..:...|.:..|.|:.:...::.|::|.::|.:|.|.|:|..
Zfish   415 KAYLILCGVVNLLSPLATSYILLMVYAVFFAIFCGGYMALLLPVLVDLVGADKLNNSMGFSMFFV 479

  Fly   591 GLLQLVGPPLCNYWFEAVNDYNPLFHALGLT-LLAGASLWSFMPWINRRKANAEEQLD 647
            ||..|.||||..:.::....|:..|:..|:. ||:..||  |:..:.||....:|:|:
Zfish   480 GLGCLTGPPLAGFLYDYTQTYDCSFYLAGVCYLLSSISL--FLEPLARRWQARKERLE 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 61/176 (35%)
MFS <451..633 CDD:475125 47/187 (25%)
slc16a4NP_001074068.2 MFS_MCT5 43..526 CDD:340979 141/590 (24%)

Return to query results.
Submit another query.