DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and slc16a5a

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:XP_021336012.1 Gene:slc16a5a / 565514 ZFINID:ZDB-GENE-121108-4 Length:506 Species:Danio rerio


Alignment Length:639 Identity:119/639 - (18%)
Similarity:211/639 - (33%) Gaps:203/639 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NKKDDKEYDLVPPDGGWGWLVLLGSCLT---NILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPA 99
            |......||  .|||||||:|||.:.:.   .:..|..|..|   :.:....|.::.::.:|:|:
Zfish    34 NANAPDSYD--APDGGWGWVVLLATIIVLALTLAFPSCIIIF---YLDLQKEFEATNSQTSWVPS 93

  Fly   100 LCYFLYSSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSF 164
            :...:..:.||:.|:|..::..|...:.||..:..||.:|.::.||..|||:.||:.|:|...||
Zfish    94 IMTAVLHAGGPLCSVLVDRFGCRATVMFGGVLSGFGMAVSSFSHSIVDLYITAGVITGLGFCFSF 158

  Fly   165 PPTVYIVTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAAL 229
            .|.|.|:..||.:.|..||.:..:|:|||...||.|..:|....|:.||.|::|.:.||..|...
Zfish   159 QPAVTILGHYFVRRRPFANAMSSTGTALGLSTLPFLCDFLKIELGWRGSFLVLGAVLLNCCVCGA 223

  Fly   230 FYEPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPG 294
            ...|:..   |.||....:.|.|:..|                                      
Zfish   224 VMRPIRP---RKPRKTNEINNSPKTSD-------------------------------------- 247

  Fly   295 DERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSS 359
                  .:.....:.||.:.|                            |..|.:          
Zfish   248 ------KKGCMLGICQSLASS----------------------------LRQQMA---------- 268

  Fly   360 SNKLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTG 424
                                                                             
Zfish   269 ----------------------------------------------------------------- 268

  Fly   425 QDGSYADVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNK 489
                                  ||| ...:..:.|..:..:...:.:...:|.|..:..|...:.
Zfish   269 ----------------------FDL-FCSNTRFRVFSLGITWMMLGFVVPLIYLVPYASADDMDP 310

  Fly   490 SLSAYLLSVVSATDLIGRIGGSALSDMGYIPKTWY-------FVGGLSISGLSLALLPFAWTYSS 547
            |.:|.|||::...::..|.....|..:     .|:       |...|.|:|||.::...:.::..
Zfish   311 SRAALLLSILGFVNIFVRPPVGVLFSL-----PWFKGRHIYVFSAALLINGLSNSICCISASFPV 370

  Fly   548 VCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYN 612
            :..:...:||:..:...:...::.|.:...|..|:.|:...:..:..|:||||..:..:....|.
Zfish   371 LLVYVLTYGLSMSVVGSLMFTVLMDTVEMSRFPSALGLLSIMESVTLLIGPPLAGFLVDRTQLYT 435

  Fly   613 PLFHALGLTLLAGASLWSF-MPWINRRKANAEE---------QLDAQIEKAAVD 656
            .:|.|..:.::..|....| ..|::.|.|..::         ..|.|.....:|
Zfish   436 YVFMACTIIVVLSALFLMFTFYWLDSRDAAKKDSPAKPAINISTDCQYSSVPID 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 115/623 (18%)
MFS 59..>234 CDD:119392 53/177 (30%)
MFS <449..633 CDD:119392 35/191 (18%)
slc16a5aXP_021336012.1 2A0111 38..457 CDD:331689 112/601 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.920

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