DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and slc16a6b

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001352167.1 Gene:slc16a6b / 561766 ZFINID:ZDB-GENE-110208-3 Length:527 Species:Danio rerio


Alignment Length:629 Identity:131/629 - (20%)
Similarity:236/629 - (37%) Gaps:165/629 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSSI 114
            |||||||:|........:...|.||:||:...:....|:.:.::.:|..::|.|:.:...|:|::
Zfish    17 PDGGWGWMVAAAFFFVEVFTYGIIKTFGIFLQDLMTEFHETNSRVSWAVSICVFVMAFTAPLSTL 81

  Fly   115 LSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLR 179
            ||.::.:|.|.::||...|||.|.:....||:.:||:.|::.|:|..|:|.|||.|::.||:|.|
Zfish    82 LSNRFGHRPVVMVGGFLISLGTITTALTQSIDEMYITMGIVAGLGYCLTFLPTVTILSQYFSKRR 146

  Fly   180 GLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRA 244
            .|...:..:|.....:...|.:..|.|..|:....:::|.:..::.|.....:|:          
Zfish   147 SLVTSIASTGECFSMLAFAPAMNALKEQIGWRYCLMVIGVLQASIIVCGALLKPI---------- 201

  Fly   245 RQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAVV 309
                                 |.:|.|..:.|.         .|||                .|:
Zfish   202 ---------------------VIKPKPATQEAS---------TSPL----------------KVL 220

  Fly   310 QSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRLS 374
            .|...:.:||                  |.|     |..|:.:..:..|||.....:...|....
Zfish   221 DSKYDAENEF------------------TCT-----SFDSVDSGVQSISSSQVNLAKEQQKKEEE 262

  Fly   375 KRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQAQ 439
            ..||.|               ..:.|:..|.:|                                
Zfish   263 GESPET---------------PLKQKQEDSSVS-------------------------------- 280

  Fly   440 QPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATDL 504
               |:|..|.|:|:|..:....:......:.:....|.:.....:||.::..:.|:||.::..::
Zfish   281 ---RTKLLDFSVLRDASFNCYALFGLFATLGFFAPQIYIIQLSVSRGVSQKSATYMLSAMAVAEI 342

  Fly   505 IGRIGGSALSDMGYI----PKTWYFVGGLSISGLSLALLPFAWTYSSVCFW----CA-LFGLASG 560
            .||:      .||::    |....::  |.|..:.|..:...:|:.|. ||    |: |:|...|
Zfish   343 GGRL------SMGWVLNRKPIRKIYI--LLICTVLLCPVLVVFTFVSE-FWGLMSCSCLYGFLLG 398

  Fly   561 IYVGITAVIMA--DMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHA------ 617
            ........::|  |::|.:|::|:.|:.:.:.....|.||||..:..:..|:|...|::      
Zfish   399 TVASSHIPMLAEDDVIGIQRMSSAVGVYVCIQSFAGLAGPPLGGFLVDQTNNYGSAFYSCAAGMG 463

  Fly   618 -----LGLTLLAGASLWSFMPWINRRKANAEEQLDAQIEKAAVD 656
                 |||...|...|     ...:||...::..|........|
Zfish   464 VGALFLGLVRPAKTGL-----CFGKRKRKDQQSADRDASSQGSD 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 130/624 (21%)
MFS 59..>234 CDD:119392 46/174 (26%)
MFS <449..633 CDD:119392 44/205 (21%)
slc16a6bNP_001352167.1 2A0111 17..512 CDD:331689 131/629 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5252
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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