DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and slc16a3a

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001119873.1 Gene:slc16a3a / 561627 ZFINID:ZDB-GENE-061009-16 Length:501 Species:Danio rerio


Alignment Length:621 Identity:131/621 - (21%)
Similarity:223/621 - (35%) Gaps:196/621 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 DDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLY 105
            ||....:..|||||||.||.|..:.........|:..|.|.|....|....:..|||.::...:.
Zfish     7 DDGGCKVKAPDGGWGWAVLFGCFVITGFSYAFPKAVSVFFKELIREFGVGYSDTAWISSILLAML 71

  Fly   106 SSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYI 170
            ...||:.|||..::..|.|.|:||..|||||||:.:|:||..:|:..||:.|:|..|:|.|::.:
Zfish    72 YGTGPLCSILVNRFGCRPVMLVGGLFASLGMILASFATSIIHIYLCTGVITGLGMALNFQPSLIM 136

  Fly   171 VTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVE 235
            :..||::.|.|||||..:||.:....|.||.:.|...||:.|..||:|||.||.........|:.
Zfish   137 LNRYFSEKRPLANGLAAAGSPVALCCLSPLGQVLQYEYGWRGGFLILGGILLNCCACGALMRPLV 201

  Fly   236 QHMVRVPRARQA--LENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERL 298
            .     |::.:|  :||.|::                     .||.:.|                
Zfish   202 P-----PKSSEAPGIENAPDD---------------------GDKTVKP---------------- 224

  Fly   299 QFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKL 363
                                                                             
Zfish   225 ----------------------------------------------------------------- 224

  Fly   364 TLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGS 428
                                                                             
Zfish   225 ----------------------------------------------------------------- 224

  Fly   429 YADVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSA 493
                          :.|..|.|:.:|..:|:..|:.|...:......:.:.|:.:..|...:.||
Zfish   225 --------------KPKLLDFSVFRDRGFLIYTIAASIMVLGLFVPPVFVVSYAKELGNEDTKSA 275

  Fly   494 YLLSVVSATDLIGRIGGSALSDMGYI-PKTWY-FVGGLSISGLSLALLPFAWTYSSVCFWCALFG 556
            .|||::...|:..|.....::.:.:: |:..| |...|..:|::..:...:..|:|:..:|..||
Zfish   276 LLLSILGFIDIFARPTCGIIAGLQWVRPRCVYLFSFALIFNGITDLVGSLSKDYTSLVVFCIFFG 340

  Fly   557 LASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLT 621
            ::.|:...:...::..::|||:.:|:.|:.|.:..:..|||||......:....|..:|...|:.
Zfish   341 ISYGMVGALQFEVLMAVVGTEKFSSAIGLVLMLEAIAVLVGPPSAGRLLDHTKKYMFVFLLAGIE 405

  Fly   622 LLAGASLWSFMPWINRRKANAEEQLDAQIEKAAVDS 657
            ::..|.:.:...::..:|  ..|..||    |||:|
Zfish   406 VVLSALVLAICNFLCIKK--KPEAPDA----AAVES 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 125/607 (21%)
MFS 59..>234 CDD:119392 62/174 (36%)
MFS <449..633 CDD:119392 40/185 (22%)
slc16a3aNP_001119873.1 2A0113 16..436 CDD:273325 129/612 (21%)
MFS 22..416 CDD:119392 115/579 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.920

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