DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and si:dkey-246g23.4

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001106809.3 Gene:si:dkey-246g23.4 / 559426 ZFINID:ZDB-GENE-050419-234 Length:457 Species:Danio rerio


Alignment Length:611 Identity:127/611 - (20%)
Similarity:232/611 - (37%) Gaps:181/611 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSS 113
            |.|||:||.::|.:.|...|..|.||||||.|.|....|:::.|.::||.::.........||.|
Zfish    14 PLDGGYGWFIVLSTFLVFGLTFGVIKSFGVFFVEIHHYFSTTATASSWITSISVATVHIGAPVGS 78

  Fly   114 ILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKL 178
            .||..:.:|.|.:.||..:|:||:|..:|..:..|||:.|.|.|.|..|::.|||.::..||.|.
Zfish    79 ALSTYFGHRPVVMAGGLLSSVGMVLGSFAQDLLQLYITVGFLTGFGYALTWTPTVTMLGWYFDKR 143

  Fly   179 RGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPR 243
            |.:||.|..:|..|.:.||.|..:.:::.:.:.|:.||:|.:.||:.|......|:.:|      
Zfish   144 RPVANALSSTGECLLTFILTPSFQLMVDQFSWRGAMLILGALQLNLCVCGALLRPLSRH------ 202

  Fly   244 ARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAV 308
                                                                             
Zfish   203 ----------------------------------------------------------------- 202

  Fly   309 VQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRL 373
              .|.|  |..:....::|                             :.|:|:           
Zfish   203 --DYFK--DSIEENEHELS-----------------------------KCSNNR----------- 223

  Fly   374 SKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQA 438
                                                                    ||.|     
Zfish   224 --------------------------------------------------------ADSD----- 227

  Fly   439 QQPQRSK---FFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVS 500
              |.:.|   :.|.:|:.:..::|..:.....|:.:....:.|..:..::|..:..:|.|:|:.:
Zfish   228 --PMKVKVIRYVDYTLIANSRFMVYSMFGIFAALGFFAPSLFLVPYARSQGVEEYQAASLMSISA 290

  Fly   501 ATDLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGI 565
            ..||:||:....::::..:......:|.:.:.|..|.|.|.|.|::.:..:.|.:||..|..|.|
Zfish   291 VLDLLGRVFFGWVANLRLVETVHQLIGTVVLLGAVLLLCPLATTFTQLAVFSAGYGLVFGATVAI 355

  Fly   566 TAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGASLWS 630
            ...::|:::|.|||.|:.|..:.:.....|:||||...:.:.::||...|...|:.||..|....
Zfish   356 HITVLAEVVGVERLGSALGFFMLIRSSGGLLGPPLAGIFIDKMSDYGAGFLMAGVALLVSALFLI 420

  Fly   631 FMPWINRRKANAEEQLDAQIEKAAVD 656
            .:.::|:::...::.:.::.|:...|
Zfish   421 VLHFMNKKETEHKKDICSENEEEHED 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 62/175 (35%)
MFS <451..633 CDD:475125 44/181 (24%)
si:dkey-246g23.4NP_001106809.3 None

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