DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and slc16a12a

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:XP_009291327.1 Gene:slc16a12a / 557762 ZFINID:ZDB-GENE-080721-24 Length:617 Species:Danio rerio


Alignment Length:675 Identity:150/675 - (22%)
Similarity:278/675 - (41%) Gaps:135/675 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHKEKIIN-----------SQNASKINQKDHKPNGNTNESRHKTVSLINKKDDKEYDLVP----- 49
            |.:::::|           ::...|..|:..:..|.....:...:.:..|.        |     
Zfish     9 MREKELVNTSRTEPGRAKPAETGQKRKQEAERSEGMKERMKRGRLEMGEKN--------PCLATA 65

  Fly    50 PDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSSI 114
            |||||||:::.|..||.:......:...:.|.||...|:...:..|||.:|.........|:.|.
Zfish    66 PDGGWGWMIVAGCFLTTVCTRAVTRCVSIFFVEFQLYFSRDYSATAWIHSLLDCTTMLCAPLGSY 130

  Fly   115 LSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLR 179
            :..:.|.|...::||..:|.|::||..|:|:||||::.|||.|:|..||:.|.:.:|.|||.:.:
Zfish   131 IGNRLSSRIAIMIGGLLSSTGLLLSSLATSVEFLYLTLGVLTGVGFALSYTPAIAMVGSYFRQRK 195

  Fly   180 GLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRA 244
            .||.|:.:|||.:|:.||.|.::.|:|.:.:.|:.||:.|:..::.|......|::..     |.
Zfish   196 ALAYGIAMSGSGIGTFILAPAVQLLIEFFSWRGALLILAGLVSHLCVCGALMRPLQSQ-----RG 255

  Fly   245 RQ---ALENIPEEEDIGIVMKF----------ENVDEPVPKNEPADKPLLPYN-----SPPSPLY 291
            ||   .|||....:.:.:.:.:          ..|.:.:.|.||::..|....     ......:
Zfish   256 RQNKMDLENGKTVDLLNVKLAYVELRGSMEVTHAVVKEMEKKEPSENMLRNGKGWIEADDMKQSH 320

  Fly   292 LPGDERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPV-----RLP-------QRNQTFTPGQL 344
            |.|:|......|.:...|..:|      :...|.||.|.     .||       |:|.||     
Zfish   321 LDGEENHGQDLSENPKTVNKWS------EEEPRTISIPALVQSSGLPLENLLKYQKNITF----- 374

  Fly   345 NSQSSLYAVPEGRSSSNKLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLR 409
                     ||.:|..      |:::|.::|.....:..|..|.....|.|              
Zfish   375 ---------PESKSEG------NNNQSTVAKSKVVKAKLLKESKENVWSVL-------------- 410

  Fly   410 SMGSSGTGHAGDSTGQDGSYADVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYT-N 473
                                            :::...:.|.|..|.:|::|:|....|...: .
Zfish   411 --------------------------------RKTVLKEYSFLLIPDFLLLLVSFLFLAYGCSVP 443

  Fly   474 FIILLPSFGEARGFNKSLSAYLLSVVSATDLIGRIGGSALSDMGYIP--KTWYFVGGLSISGLSL 536
            |:.|:| :..:.|.:...:|.::|::..:.:||.|....::|...:.  :...::..:...|||.
Zfish   444 FVYLVP-YSLSAGVSPQQAALVMSILGVSGIIGTITFGWIADRKCLRPYRVVSYMLAVGSEGLSC 507

  Fly   537 ALLPFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLC 601
            ..||....:|.:..:..::|...|.||.:..|:.:|.:.:.:|||:.|:..|::.:..|:.||:.
Zfish   508 LFLPLLSGFSLLVPFSLIYGYFDGAYVALIPVVTSDTVSSAQLTSALGVVYFLHAIPYLISPPIG 572

  Fly   602 NYWFEAVNDYNPLFHALGLTLLAGA 626
            .:..:....|...|...|::|:..|
Zfish   573 GWLVDQTGSYTATFILSGVSLICSA 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 144/616 (23%)
MFS 59..>234 CDD:119392 56/174 (32%)
MFS <449..633 CDD:119392 42/181 (23%)
slc16a12aXP_009291327.1 2A0113 55..601 CDD:273325 145/629 (23%)
MFS 75..604 CDD:119392 136/601 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - otm25394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
77.020

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