DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and slc16a1

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001015931.1 Gene:slc16a1 / 548685 XenbaseID:XB-GENE-1014566 Length:490 Species:Xenopus tropicalis


Alignment Length:612 Identity:131/612 - (21%)
Similarity:236/612 - (38%) Gaps:174/612 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLT---NILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGP 110
            ||:|||||:|::.:.::   :...|   ||..|.|.:....|.::.::.:||.::...:..:.||
 Frog    13 PPEGGWGWVVVVAAFVSIGFSYAFP---KSITVFFKDIEAIFGATSSEVSWISSIMLAVMYAGGP 74

  Fly   111 VSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYF 175
            :||:|..||..|.|.:.||..|..|:|.:.:.:::..||:..||:.|.|...:..|.:.::..||
 Frog    75 ISSVLVNKYGSRPVMIAGGCLAGTGLIAASFCNTVAELYLCIGVVGGFGLAFNLNPALTMIGKYF 139

  Fly   176 AKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVR 240
            .|.|.:||||.::||.:....|.||.::....:|:.||.||:||:..|..||.....|:.     
 Frog   140 FKKRPIANGLAMAGSPVFLSTLAPLNQYFYSIFGWRGSFLILGGLLFNCCVAGSLMRPIG----- 199

  Fly   241 VPRARQALENIPEE--EDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRS 303
             |:.....:.:.:|  |:.|..:..|:.|        |.|.|:                      
 Frog   200 -PKPEDTKKKVTKEVLEEAGKCVSKEDGD--------AHKDLI---------------------- 233

  Fly   304 ASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNS 368
                                                               ||::.: |.||   
 Frog   234 ---------------------------------------------------EGKAKT-KPTL--- 243

  Fly   369 SKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVD 433
                                        ||                                   
 Frog   244 ----------------------------FQ----------------------------------- 245

  Fly   434 ARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSV 498
                    ..:||.||||.....:|:.|..:..........::.|.::.:::..:...:|:|||:
 Frog   246 --------TINKFLDLSLFTHRGFLLYLSGHMIMFFGLFAPLVFLSNYAKSKNISPESAAFLLSI 302

  Fly   499 VSATDLIGRIGGSALSDMGYI-PKTWYFVG-GLSISGLSLALLPFAWTYSSVCFWCALFGLASGI 561
            ::..|:|.|.....:::..:: ||..||.. .:..:|:...|:|.:.:|...|.:...||.|.|.
 Frog   303 LAIVDMIARPSMGIVANTKWVRPKIQYFFAVAVLYNGICHLLVPLSTSYVGFCIYAGFFGFAFGW 367

  Fly   562 YVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGA 626
            ...:....:.|::|.:|.:|:.|:...|.....|:||||.....:...||...:.|.|:.|:. |
 Frog   368 LSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGRLNDIYGDYKYTYQACGIVLIV-A 431

  Fly   627 SLWSFMPWINRRKANAEEQLDAQIEKA 653
            |::.|:......:..|:|| .|:.:||
 Frog   432 SVYLFIGMTIHYRLLAKEQ-KAEQKKA 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 55/178 (31%)
MFS <451..633 CDD:475125 43/183 (23%)
slc16a1NP_001015931.1 2A0113 6..471 CDD:273325 131/612 (21%)

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