DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and slc16a1

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001015931.1 Gene:slc16a1 / 548685 XenbaseID:XB-GENE-1014566 Length:490 Species:Xenopus tropicalis


Alignment Length:612 Identity:131/612 - (21%)
Similarity:236/612 - (38%) Gaps:174/612 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLT---NILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGP 110
            ||:|||||:|::.:.::   :...|   ||..|.|.:....|.::.::.:||.::...:..:.||
 Frog    13 PPEGGWGWVVVVAAFVSIGFSYAFP---KSITVFFKDIEAIFGATSSEVSWISSIMLAVMYAGGP 74

  Fly   111 VSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYF 175
            :||:|..||..|.|.:.||..|..|:|.:.:.:::..||:..||:.|.|...:..|.:.::..||
 Frog    75 ISSVLVNKYGSRPVMIAGGCLAGTGLIAASFCNTVAELYLCIGVVGGFGLAFNLNPALTMIGKYF 139

  Fly   176 AKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVR 240
            .|.|.:||||.::||.:....|.||.::....:|:.||.||:||:..|..||.....|:.     
 Frog   140 FKKRPIANGLAMAGSPVFLSTLAPLNQYFYSIFGWRGSFLILGGLLFNCCVAGSLMRPIG----- 199

  Fly   241 VPRARQALENIPEE--EDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRS 303
             |:.....:.:.:|  |:.|..:..|:.|        |.|.|:                      
 Frog   200 -PKPEDTKKKVTKEVLEEAGKCVSKEDGD--------AHKDLI---------------------- 233

  Fly   304 ASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNS 368
                                                               ||::.: |.||   
 Frog   234 ---------------------------------------------------EGKAKT-KPTL--- 243

  Fly   369 SKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVD 433
                                        ||                                   
 Frog   244 ----------------------------FQ----------------------------------- 245

  Fly   434 ARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSV 498
                    ..:||.||||.....:|:.|..:..........::.|.::.:::..:...:|:|||:
 Frog   246 --------TINKFLDLSLFTHRGFLLYLSGHMIMFFGLFAPLVFLSNYAKSKNISPESAAFLLSI 302

  Fly   499 VSATDLIGRIGGSALSDMGYI-PKTWYFVG-GLSISGLSLALLPFAWTYSSVCFWCALFGLASGI 561
            ::..|:|.|.....:::..:: ||..||.. .:..:|:...|:|.:.:|...|.:...||.|.|.
 Frog   303 LAIVDMIARPSMGIVANTKWVRPKIQYFFAVAVLYNGICHLLVPLSTSYVGFCIYAGFFGFAFGW 367

  Fly   562 YVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGA 626
            ...:....:.|::|.:|.:|:.|:...|.....|:||||.....:...||...:.|.|:.|:. |
 Frog   368 LSSVLFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPLLGRLNDIYGDYKYTYQACGIVLIV-A 431

  Fly   627 SLWSFMPWINRRKANAEEQLDAQIEKA 653
            |::.|:......:..|:|| .|:.:||
 Frog   432 SVYLFIGMTIHYRLLAKEQ-KAEQKKA 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 129/610 (21%)
MFS 59..>234 CDD:119392 52/177 (29%)
MFS <449..633 CDD:119392 45/185 (24%)
slc16a1NP_001015931.1 2A0113 6..471 CDD:273325 131/612 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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