DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and slc16a12b

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001139286.1 Gene:slc16a12b / 449947 ZFINID:ZDB-GENE-050522-80 Length:488 Species:Danio rerio


Alignment Length:630 Identity:139/630 - (22%)
Similarity:246/630 - (39%) Gaps:181/630 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 KDDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFL 104
            ::.|:..::||||||||:::.|..:..:......:...:.|.||...|....:..|||.:|....
Zfish    14 QEKKKGGVLPPDGGWGWMIVAGCFVVTVCTRAVTRCISIFFVEFQMHFAKDYSGTAWIHSLVDCT 78

  Fly   105 YSSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVY 169
            .....|:.|::..:.|.|...:|||..||:|::||.:|:|:|:||.:.|:|.|:|..|.:.|.:.
Zfish    79 TMLCAPLGSLIGNQLSCRIAVILGGFLASVGLVLSSFATSLEYLYATLGLLTGLGFALCYTPAIA 143

  Fly   170 IVTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPV 234
            :|..||.:.:.||.|:.:|||.:|:.||.|:::.|:|.|.:.|:.||:||..||:.|......|:
Zfish   144 MVGIYFCERKALAYGIAMSGSGIGTFILAPVVQLLIEHYSWRGALLILGGFVLNLCVCGALLRPI 208

  Fly   235 EQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQ 299
                  :.:..:|.. :|.:.:.|..:|                       ||:   |.|..   
Zfish   209 ------ILKEEEACP-LPVDSECGYSVK-----------------------PPT---LNGGP--- 237

  Fly   300 FVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLT 364
             .|||::...|...:|..|:..        :.:|.                :.|..|        
Zfish   238 -TRSAASDAKQRCFQSMQEYHF--------LLMPD----------------FLVLAG-------- 269

  Fly   365 LRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSY 429
                             |||.:::   |.:|.|                                
Zfish   270 -----------------SFLLLAS---GCSLPF-------------------------------- 282

  Fly   430 ADVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAY 494
                                      :|||                    .:....|.....:|:
Zfish   283 --------------------------VYLV--------------------PYALDVGVGHQHAAF 301

  Fly   495 LLSVVSATDLIGRIGGSALSDMGYIPK----TWYFVGGLSISGLSLALLPFAWTYSSVCFWCALF 555
            |:|::...|::|.|....|:|...:.|    .:.|..|:  .||....:|...|:..:..:..|:
Zfish   302 LMSILGVIDIVGNITFGWLTDRRCLKKYRNICYMFAVGM--EGLCCLFIPLLRTFVWLVPFSVLY 364

  Fly   556 GLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGL 620
            |...|.||.:..|:.:|::|.:.|:|:.|:..|::.:..||.||:..:..:....|...|...|.
Zfish   365 GYFDGAYVALIPVVTSDVVGRQYLSSALGVVYFLHAVPYLVSPPIGGWLVDTTGTYTATFFLSGF 429

  Fly   621 TLLAGASLWSFMPWINR-----RKANAEEQLDAQI--EKAAVDSY 658
            .|:: :||..|...|.|     :|.|:..::...:  |...||.|
Zfish   430 ALIS-SSLLLFSVAIIRYCQRNQKKNSLSKIPKLVSCEGKQVDYY 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 58/175 (33%)
MFS <451..633 CDD:475125 42/185 (23%)
slc16a12bNP_001139286.1 MFS_MCT12 29..430 CDD:340982 120/569 (21%)

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