DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and CG13907

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001286894.1 Gene:CG13907 / 38104 FlyBaseID:FBgn0035173 Length:816 Species:Drosophila melanogaster


Alignment Length:755 Identity:178/755 - (23%)
Similarity:309/755 - (40%) Gaps:168/755 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DHKPNGNTNESRHKTVSLINKKDDKEYDLV------PPDGGWGWLVLLGSCLTNILIPGTIKSFG 77
            :..|....|:.        |.:||.:.:.|      |||||:||::...|.:.|:::.|...:||
  Fly    43 EQSPEDEDNQD--------NDEDDDDEESVYGELPPPPDGGYGWVICFASFMCNMIVDGIAYTFG 99

  Fly    78 VLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWA 142
            :...||...|:......||:.:|...:|.|.||:.|.|:.||..|.|.:.|...|.:..:||.::
  Fly   100 IFLEEFVAYFHEGKGTVAWVGSLLSGVYLSAGPIVSALANKYGCRAVCIAGSIIACIAFVLSTFS 164

  Fly   143 SSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLET 207
            :::..|..:||.:.|.|.|:.:.|.|..|..||...|.||.|:.:.||..|:....||..:|||.
  Fly   165 TNVSMLMATYGFMGGFGFGMIYLPAVVAVGYYFETKRSLATGIAVCGSGFGTFAFAPLATYLLEE 229

  Fly   208 YGYHGSCLIMGGITLNVFVAALFYEPV------------------------------EQHMVRVP 242
            ||:..:.||..|:.||..:......|:                              ...||::|
  Fly   230 YGWKNALLIFAGLILNCAIFGAMMRPLTYPKKKKQKPLMQRMYEEKQLQLERGSFAGSHFMVQLP 294

  Fly   243 --------------------------RARQA-------LENIPEEEDIGIVMKFENVDEPVPKNE 274
                                      .|:||       :..:|...:..:|..........|.|.
  Fly   295 DGTIERKLKMPLNADPGVHSSLNLELLAQQAGGGGLHPVSTLPTITESKVVDVHRQNGAQSPPNG 359

  Fly   275 PADKPL---------------------LPYNSPPS-------PLYLPGDERLQFVRSASAAVVQS 311
            .::..|                     .||:|..:       |.:|.||.             ||
  Fly   360 DSNGQLSARSAAGAVGRRPHRNSESENSPYHSQDAMTRNASQPAFLAGDH-------------QS 411

  Fly   312 YSKSGD--EFQSRSRKISTPVRLPQRNQTFTPG----QLNSQSSLYAVPEGRSSSNKLTL----- 365
            ..|:|.  .|.:|.||.|.       ::.|.|.    :..|:..|.|...|..:|:||:|     
  Fly   412 LPKNGSVPAFNTRVRKTSA-------SERFQPSLAAIRATSRGDLEAGAGGDFASSKLSLSQRQG 469

  Fly   366 --RNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGS 428
              :..|..|:.:  |.:...::    |.||..:.  .::.|..||.:..:|............ |
  Fly   470 GSQTGSSGRMVR--PMSRKDIF----YSGSVTNL--PQYQSQKSLANYRNSVLSLTKYEKSMQ-S 525

  Fly   429 YADVDARGQAQQ-------------PQRSK-----FFDLSLLKDPMYLVILISNSTN-AISYTNF 474
            .|.:|...:|::             |...|     ..|:||||||::::|.:||... |..|..|
  Fly   526 VAKLDPLAEAEKHREEYDLCPCLGIPDSVKSVVNTMLDVSLLKDPVFMLIGVSNIFGMAGLYVPF 590

  Fly   475 IILLPSFGEARGFNKSLSAYLLSVVSATDLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALL 539
            :.|:.:..| ....|:.:|.|||::..|:.:||:....::|:..:.........|.:|.:::.|.
  Fly   591 VYLVDAAKE-HDIPKNDAAMLLSIIGITNTVGRVFCGWVADLPQVNSLLLNNCCLLVSTIAVTLT 654

  Fly   540 PFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYW 604
            |..::|::.......||||...|:.:|::|:.|:||.::||:::|:.:...|...|:|.||....
  Fly   655 PLCYSYAAYITMSIFFGLAISGYISLTSIILVDLLGLDKLTNAFGLLILFRGFAALIGTPLAGAI 719

  Fly   605 FEAVNDYNPLFHALGLTLLAGASLWSFMPWINRRKANAEE 644
            ::..:.|:..|:..| .|...:::.||:....:|.:.:||
  Fly   720 YDMTHTYDLPFYMAG-ALFGISTITSFLAPCLKRCSPSEE 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 172/719 (24%)
MFS 59..>234 CDD:119392 55/174 (32%)
MFS <449..633 CDD:119392 52/184 (28%)
CG13907NP_001286894.1 MFS 78..>258 CDD:119392 57/179 (32%)
MFS <570..748 CDD:119392 47/179 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I4618
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I274
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
87.970

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