DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and slc16a1b

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_956379.1 Gene:slc16a1b / 368274 ZFINID:ZDB-GENE-030515-5 Length:461 Species:Danio rerio


Alignment Length:618 Identity:131/618 - (21%)
Similarity:226/618 - (36%) Gaps:207/618 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLT---NILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGP 110
            ||:|||||.|::|:.::   :...|   ||..|.|.|....||::.::.:||.::...:..:.||
Zfish    13 PPEGGWGWAVVVGAFISIGFSYAFP---KSITVFFKEIEVIFNATSSQVSWISSIMLAVMYAGGP 74

  Fly   111 VSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYF 175
            :||||..|:..|.:.:.||..:..|::.:.:..::|.||...||:.|:|...:..|.:.::..||
Zfish    75 ISSILVNKFGSRPIMIAGGCLSGTGLVAASFCDTVEGLYFCVGVIGGLGLAFNLNPALTMIGKYF 139

  Fly   176 AKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVR 240
            .|.|.:|||:.::||.:....|.||..||.:.:|:.||.||:||..||..||.....|:.     
Zfish   140 YKRRPIANGIAMAGSPVFLSTLAPLNSWLFDQFGWRGSFLILGGALLNCCVAGSLMRPIG----- 199

  Fly   241 VPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSAS 305
                                          ||.:||               :|            
Zfish   200 ------------------------------PKPQPA---------------IP------------ 207

  Fly   306 AAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSK 370
                    |...|.:            ||..:|                                
Zfish   208 --------KEDAEIK------------PQEKKT-------------------------------- 220

  Fly   371 SRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDAR 435
                           |....:|                                           
Zfish   221 ---------------VMQTING------------------------------------------- 227

  Fly   436 GQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVS 500
                      |.||:|.....:|:.|:.|..........::.|.::.:::..:|..:|:|||:::
Zfish   228 ----------FLDLTLFTHRGFLLYLLGNVIMFFGLFAPLVFLSNYAKSKHISKDKAAFLLSILA 282

  Fly   501 ATDLIGRIGGSALSDMGYIPKT--------WYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGL 557
            .||:|.|      ..||.:..|        ::|...:..:|:...|.|.:..|.....:...||:
Zfish   283 FTDMIAR------PSMGLVANTRWVRPRIQYFFAASVLYNGVCHLLAPLSTDYLGFAIYAVFFGV 341

  Fly   558 ASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTL 622
            |.|....:....:.|::|.:|.:|:.|:...|.....|:||||.....:..:||...:...|:.|
Zfish   342 AFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECAPVLLGPPLLGRLNDIYDDYKYTYQGCGIVL 406

  Fly   623 LAGASLWSFMPW-INRR---KANAEEQLDAQIE 651
            :. ||::.|:.. ||.|   |...||:..|::|
Zfish   407 VI-ASIFLFVGMGINYRLVDKEKKEEEKRAKLE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 131/618 (21%)
MFS 59..>234 CDD:119392 55/177 (31%)
MFS <449..633 CDD:119392 45/191 (24%)
slc16a1bNP_956379.1 2A0113 1..442 CDD:273325 131/618 (21%)
MFS 20..415 CDD:119392 116/586 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.820

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