DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and CG10019

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001368939.1 Gene:CG10019 / 33600 FlyBaseID:FBgn0031568 Length:1159 Species:Drosophila melanogaster


Alignment Length:658 Identity:119/658 - (18%)
Similarity:219/658 - (33%) Gaps:250/658 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NTNESRHKTV----SLINKKD-------DKEYDL----VP-----------------PDGGWGWL 57
            |.:.|.|.|.    .:.:::|       |:|:.|    :|                 |||||||:
  Fly   382 NHHPSLHATTPHPSHITDEEDSAFPGLADREFHLLHRNIPALRRTGVDTTRIRQYFYPDGGWGWI 446

  Fly    58 VLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSS----LGPVSSILSV- 117
            :...|.|.:||..|...|:|:|                |..|:.|...:|    ||.:|..:|: 
  Fly   447 ICGVSFLVHILTTGLQLSYGLL----------------WFYAVQYLHNTSGIELLGALSWSVSMV 495

  Fly   118 ----------KYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVT 172
                      |.|.|.::::||....||::.:.:|:....:..|||::.|:|..:....:..::.
  Fly   496 ATSFVVSLCRKRSIRLLSIVGGLVMPLGILFTSFATEFGQVVFSYGIVFGVGVAMVREASTVMLG 560

  Fly   173 SYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQH 237
            :||.:.|.....:.:||..:|..:...:|:..:...|:.....|:..:|...|...|.|.|...:
  Fly   561 NYFKRRRQFVEMVAMSGEGVGIALFSVILKEGVGKAGWRLGLQIVAALTALSFFMGLMYRPASLY 625

  Fly   238 MVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVR 302
            ..:    |:|::::..:.                |.....||:|..:...:|.|...|       
  Fly   626 HPQ----RRAIQHLKNQR----------------KKMREKKPILSQDVESTPKYFFLD------- 663

  Fly   303 SASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRN 367
                                                        .|||      :|.:.|:.|..
  Fly   664 --------------------------------------------ISSL------KSVTVKILLMT 678

  Fly   368 SSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADV 432
            |          |.:||                                           |.|.  
  Fly   679 S----------SVASF-------------------------------------------GIYT-- 688

  Fly   433 DARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLS 497
                                  ||:|:.|  |:....|....::||.:|   .|.:.:     |.
  Fly   689 ----------------------PMFLMAL--NAAEQGSDVQELVLLQTF---LGISMA-----LG 721

  Fly   498 VVSATDLIGRIGGSALSDMGYIPKTWYFVGG--------LSISGLSLALLPFAWTYSSVCFWCAL 554
            ||.|..|:.|.         ::.:  :||..        |||..|::..|.|...|:.:|....|
  Fly   722 VVIAGALLRRC---------FVIR--HFVINTKIVTQLFLSIVALAILFLSFVMGYTGLCILSWL 775

  Fly   555 FGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALG 619
            :|:..|.:.....::..:.:..:..:.::|....|..:..|:..||.::    :|||:..:...|
  Fly   776 YGIGLGGFQYSLKILALERIKLKHFSKAWGFIRGVESVPVLISVPLTSF----LNDYSLKYGRAG 836

  Fly   620 LTLLAGAS 627
            ..:.:.|:
  Fly   837 YYICSAAA 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 111/619 (18%)
MFS 59..>234 CDD:119392 42/189 (22%)
MFS <449..633 CDD:119392 39/187 (21%)
CG10019NP_001368939.1 MFS_MCT_SLC16 444..840 CDD:340910 104/590 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.