DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and out

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_573378.1 Gene:out / 32926 FlyBaseID:FBgn0259834 Length:655 Species:Drosophila melanogaster


Alignment Length:678 Identity:152/678 - (22%)
Similarity:257/678 - (37%) Gaps:106/678 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SKINQKDHKP--NGNTNESRHKTVSLINKKDDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKS 75
            |.:.:|:|..  |..|...:.|.    ..|.|...|.|.|||||||:|.|.:.|.|..:...::.
  Fly     4 SSLTEKNHTQVYNDTTKPKKPKR----RDKSDLGPDFVAPDGGWGWVVCLAAGLNNFFLFPALQQ 64

  Fly    76 FGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSSILSVKYSYRTVTLLGGASASLGMILSF 140
            :|:::.....:......:...|..:...:.|.:|.|:..:..::::|.|.|.|.:.|.||:.||.
  Fly    65 YGLIYRVRMQSLGFDAKQTTTIVNVVMAISSLVGIVNGAMFRRFTFRQVALTGTSLAFLGVFLSA 129

  Fly   141 WASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLRGLANGLCISGSALGSIILPPLLRWLL 205
            :.::.....|....:.|||.||:...|...|.:||...|..|.|...:.:.||.|..|.:...||
  Fly   130 FCTTFWQYIICLSAIFGIGLGLAMAATSLAVNTYFKLKRRRATGFSWTITGLGPIFFPQVSTVLL 194

  Fly   206 ETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPR--ARQALENIPEEEDIGIVMKFENVDE 268
            ..||..|:.||..||.:|..:.||..:||..| |:.|.  ....:|.|.|.|.:...:...|.:.
  Fly   195 GYYGAQGTILIYAGIAMNAILCALTLQPVLWH-VKKPEKPVHNTIEGIAETEKLQPELLEANGNL 258

  Fly   269 PVPKNEP--------------------ADKPLLPYNSPPSPLY---LPGDERLQFVRS---ASAA 307
            ..|.|:|                    :.:.|...:.|..|.|   .||...|.....   .|..
  Fly   259 LSPSNDPWKDYECKYCQYQKRSKRGLFSSQYLFNVDDPERPGYEITEPGTPMLARANDGWFGSKL 323

  Fly   308 VVQSYSKSGDEFQSRS---RKISTPVR----------------LPQRNQTFTPGQLN-------- 345
            .:.|.|..|...::|.   |::|:..|                .|.....:.|...|        
  Fly   324 SLTSESAGGARSRTRQALMRQVSSRSRENLDRLEQNRHDQGPDTPSAAALYKPNYFNREREDLDR 388

  Fly   346 --SQSSLYAVPEGRSSSNKLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSL 408
              |::|:|:.| |:....:.|.. ..|:.|.|.:.|....|:                       
  Fly   389 YASKTSVYSRP-GQDELLRCTCA-EDKALLQKTAESLQVNLF----------------------- 428

  Fly   409 RSMGSSGTGHAGDSTGQDGSYADVDARGQAQQPQR-SKFFDLSLLKDPMYLVILISNSTNAISYT 472
                         :...|.:.|:.:|:.:....|: ||||||.||:|..::.:.:..|.......
  Fly   429 -------------NNSADNTEAEEEAKRRMTFFQKVSKFFDLDLLRDFTFVNLAVGMSIMMFGEM 480

  Fly   473 NFIILLPSFGEARGFNKSLSAYLLSVVSATDLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLA 537
            ||.:|.|....:.|:..:..:.::|:::..|:..|.......:...:.....|..|:....:...
  Fly   481 NFSVLTPFILNSFGYTDTQISLVMSLLACMDISVRFLAPLALEKVKLDNRVLFAFGILCIAVGRV 545

  Fly   538 LLPFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCN 602
            ::.|..:|..:.....|.|.........:.:|:...:...||.::.|:.|..|.:......|:..
  Fly   546 VVAFTDSYEIMIGVFLLIGFGKAFRTIFSPLIIPSYVPLNRLPAASGLQLIFNTIFSFAMGPILG 610

  Fly   603 YWFEAVNDYNPLFHAL-GLTLLAGASLW 629
            ...||.. |....|.: .||||| ..||
  Fly   611 ILTEAYG-YAATIHTINALTLLA-LLLW 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 49/175 (28%)
MFS <451..633 CDD:475125 36/180 (20%)
outNP_573378.1 MFS 44..>221 CDD:475125 49/176 (28%)
MFS <459..626 CDD:475125 29/167 (17%)

Return to query results.
Submit another query.