DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and Mct1

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001284810.1 Gene:Mct1 / 31198 FlyBaseID:FBgn0023549 Length:626 Species:Drosophila melanogaster


Alignment Length:659 Identity:184/659 - (27%)
Similarity:306/659 - (46%) Gaps:83/659 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 PNGNTNESRHKTVSLINKKDDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDA 86
            |....::.:|:...:     |.|....||||||||:|:.||.:.:|:..|...|||:.::||.|.
  Fly     6 PARRKSQQQHEACEM-----DMERQPTPPDGGWGWVVVFGSFMIHIVTDGMTYSFGIFYNEFLDY 65

  Fly    87 FNSSPTKAAWIPALCYFLYSSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYIS 151
            ||......|||.::...:..|.||:||....:|..|.||:.|...|:..:|:|.:|.::..|.|:
  Fly    66 FNEGKGYTAWIASIMVGVTFSSGPISSSFVNRYGCRAVTIAGSILAASCIIVSMFAQNVLTLIIT 130

  Fly   152 YGVLVGIGAGLSFPPTVYIVTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLI 216
            .|...|:|.||.:.|.:..||.||...|.||.|:.:.||..|:.:..||..:|:..||:.|:.||
  Fly   131 IGFGTGLGFGLIYLPAIVSVTQYFEAKRSLATGIAVCGSGFGTFVFAPLTEFLIGNYGWRGAMLI 195

  Fly   217 MGGITLNVFVAALFYEPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPL- 280
            :|||.||..:....:.|:|            ||..|:                .|.|.|:...| 
  Fly   196 IGGIVLNCIIFGAMFRPLE------------LEAPPQ----------------TPPNTPSTPKLA 232

  Fly   281 -----LPYNSPPSPL----YLPGDERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRN 336
                 :..|:..:.|    .||.|:.||..:....||      ||... .||..:...:: |..|
  Fly   233 KKSAIIDQNTTAAELEPLKVLPKDQYLQLPQRTDTAV------SGGAL-CRSNSVGHNLK-PNLN 289

  Fly   337 QTFTPGQLNSQS-SLYAVPEG--RSSSN-----------KLT-LRNSSKSRLSKRSPSTSSFLYV 386
            .. :.|.:|.|. :|...|:.  :|:||           :|| ||::.:.|      |.|..:|.
  Fly   290 NN-SNGAVNGQGPTLVTPPQAVVKSTSNDDIARKCHSQLQLTPLRDAHRER------SASGTMYR 347

  Fly   387 STPYHGSTLSFQPKEFSSHLSL-RSMGSSGT----GHAGDSTGQDGSYADVDARG--QAQQPQRS 444
            ....:..:|...|...||...| |||..||.    |....|.....|..:....|  ...:..|.
  Fly   348 PDALYQGSLHNLPDYVSSRNDLSRSMSGSGVIKRYGSLRQSNNVSQSQEEAKCCGCITCSKETRD 412

  Fly   445 KFFDL---SLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATDLIG 506
            .|.::   |||||.::::..:||...:|.:....:.:.::.|.....|:.::||:|.:...:.:|
  Fly   413 TFAEMMNFSLLKDMVFVIFSVSNFCTSIGFNVPYLYVVAYAETLKLTKTDASYLISTIGVANTVG 477

  Fly   507 RIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITAVIMA 571
            ||....:||..::.:...:...|:..|:|.|::|....:.|:.|:|.:||...|.|||:|:||:.
  Fly   478 RIILGYISDKPWVNRLLVYNVCLTACGVSTAMVPLCHDFQSLAFYCCVFGFTIGAYVGLTSVILV 542

  Fly   572 DMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGASLWSFMPWIN 636
            |:||.::||:::|:.|...|:...:|||:..:.::..:.|.|.|...||.:.....:...:|.:.
  Fly   543 DLLGLDKLTNAFGLLLLFQGIASFIGPPIGGWMYDLTDSYAPAFLMAGLMIAISGLVMFAIPPLQ 607

  Fly   637 RRKANAEEQ 645
            |.:....|:
  Fly   608 RLQVRKSER 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 180/632 (28%)
MFS 59..>234 CDD:119392 61/174 (35%)
MFS <449..633 CDD:119392 51/186 (27%)
Mct1NP_001284810.1 MFS 35..>213 CDD:119392 63/177 (36%)
MFS <426..604 CDD:119392 46/177 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I4618
eggNOG 1 0.900 - - E1_KOG2504
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I274
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
98.970

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