DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and Slc16a12

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001178566.1 Gene:Slc16a12 / 309525 RGDID:1311468 Length:486 Species:Rattus norvegicus


Alignment Length:593 Identity:131/593 - (22%)
Similarity:224/593 - (37%) Gaps:169/593 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSS 113
            ||||||||:::.|..|..|......:...:.|.||...|....::.|||.::...:.....|:.|
  Rat    12 PPDGGWGWMIVAGCFLVTICTRAVTRCISIFFVEFQTYFAQDYSQTAWIHSIVDCMTMLCAPLGS 76

  Fly   114 ILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKL 178
            ::|.:.|.:...:|||..||.|:||..:|:|::.||:|.|||.|:|..|.:.|.:.:|..||::.
  Rat    77 VVSNQLSCQAGIMLGGLLASTGLILGSFATSLKHLYLSLGVLTGLGFALCYSPAIAMVGKYFSRR 141

  Fly   179 RGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPR 243
            :..|.|:.:|||.:|:.||.|:::.|:|.:.:.|:.||:||..||:.|......|          
  Rat   142 KAFAYGIAMSGSGIGTFILAPVVQLLIEQFSWRGALLILGGFVLNLCVCGALMRP---------- 196

  Fly   244 ARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAV 308
                   |..:||                             |..|                   
  Rat   197 -------ITLKED-----------------------------PSGP------------------- 206

  Fly   309 VQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRL 373
                .||.|             |..||...       .|:|.|                      
  Rat   207 ----EKSHD-------------RDAQREDC-------KQASPY---------------------- 225

  Fly   374 SKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQA 438
               ||.|                   ||::......|:             |.|           
  Rat   226 ---SPLT-------------------KEWTETRLCCSL-------------QQG----------- 244

  Fly   439 QQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATD 503
                    :...|:.|  ::|:.:|....|...:...:.|..:..:.|.:...:|:|:|::...|
  Rat   245 --------YGFLLMSD--FVVLAVSVLFMAYGCSPLFVYLVPYALSVGVSHHQAAFLMSILGVID 299

  Fly   504 LIGRIGGSALSDMGYIPKTWY--FVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGIT 566
            ::|.|....|:|...:....|  ::..:::.||....||...::..:..:...||...|.||.:.
  Rat   300 IVGNITFGWLTDRRCLKNYRYVCYLFAVALDGLCYLCLPMLQSFPLLVPFSCTFGYFDGAYVTLI 364

  Fly   567 AVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGASLWSF 631
            .|:.|:::||..|:|:.|:..|::.:..||.||:..:..:....|...|...|..::..:.|..|
  Rat   365 PVVTAEIVGTTSLSSALGVVYFLHAVPYLVSPPIAGWLVDTTGSYTAAFLLCGFAMIFSSILLGF 429

  Fly   632 MPWINRRK 639
            .....|.|
  Rat   430 AKIAKRMK 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 131/593 (22%)
MFS 59..>234 CDD:119392 56/174 (32%)
MFS <449..633 CDD:119392 42/185 (23%)
Slc16a12NP_001178566.1 2A0111 12..451 CDD:331689 131/593 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..221 10/91 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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