DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and Slc16a7

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_058998.2 Gene:Slc16a7 / 29735 RGDID:3691 Length:489 Species:Rattus norvegicus


Alignment Length:613 Identity:141/613 - (23%)
Similarity:229/613 - (37%) Gaps:185/613 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VPPDGGWGWLVLLGSCLT---NILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLG 109
            :||||||||:|:..|.::   :...|   |:..|.|::..|.|.::.::.|||.::...:..:.|
  Rat    18 LPPDGGWGWVVVCASFISIGFSYAFP---KAVTVFFNDIKDIFKTTSSQIAWISSIMLAVMYAGG 79

  Fly   110 PVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSY 174
            |:||:|...|..|.|.::||.....||||:.::||:..||::.|.:.|:|...:..|.:.|:..|
  Rat    80 PISSVLVNNYGSRPVVIVGGLLCCTGMILASFSSSVIELYLTVGFIGGLGLAFNLQPALTIIGKY 144

  Fly   175 FAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMV 239
            |.:.|.||||..::||.:....|.|..::|..:||:.||.||:|.|.|:..||.....||     
  Rat   145 FYRKRPLANGFAMAGSPVFLSTLAPFNQFLFNSYGWKGSFLILGAIFLHSCVAGCLMRPV----- 204

  Fly   240 RVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSA 304
                                                          .|||            |:|
  Rat   205 ----------------------------------------------GPSP------------RAA 211

  Fly   305 SAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSS 369
                 :|.||.|..                                               ::||
  Rat   212 -----KSKSKVGSR-----------------------------------------------QDSS 224

  Fly   370 KSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDA 434
            ..||||          |||                                              
  Rat   225 TKRLSK----------VST---------------------------------------------- 233

  Fly   435 RGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVV 499
               |::..|  |.|..|.....:|:.|..|....:.....||.|..:.:.:|.:...||:||||:
  Rat   234 ---AEKINR--FLDFGLFTHRGFLIYLSGNVVLFLGMFAPIIFLAPYAKDKGVDDYNSAFLLSVM 293

  Fly   500 SATDLIGRIGGSALSDMGYI-PKTWY-FVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIY 562
            :.||:..|.....:::...| |:..| |...:..:|:...|.|.|.:|:::..:...||:..|..
  Rat   294 AFTDMFARPSVGLIANTSLIRPRIQYLFSVAIMFTGICHLLCPLAHSYTALVVYVIFFGIGFGSI 358

  Fly   563 VGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGAS 627
            ..:....:.|.:|..|.:|:.|:...|.....|.||||.....:....|..|:.|.|:.:|:...
  Rat   359 SSLLFECLMDQVGASRFSSAVGLVTIVECCPVLFGPPLAGKLLDITGQYKYLYIASGIVVLSSGI 423

  Fly   628 LWSFMPWINRRKANAEEQLD-AQIEKAA 654
            .......||.|....|.:.: |:.:|:|
  Rat   424 YLLICNAINYRLLEKERKREKARRKKSA 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 139/609 (23%)
MFS 59..>234 CDD:119392 56/177 (32%)
MFS <449..633 CDD:119392 45/185 (24%)
Slc16a7NP_058998.2 2A0113 21..436 CDD:273325 135/593 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..227 11/84 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..489 3/11 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5173
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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