DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and Slc16a13

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001005530.1 Gene:Slc16a13 / 287451 RGDID:1359138 Length:428 Species:Rattus norvegicus


Alignment Length:586 Identity:130/586 - (22%)
Similarity:210/586 - (35%) Gaps:201/586 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSS 113
            ||||||||:|:|.:...:.|:.|.::||||.|.||..||.....:.:||.::...:.....|:.|
  Rat     7 PPDGGWGWMVVLSAFFQSALVFGVLRSFGVFFVEFVAAFEEQAARVSWIASIGIAVQQFGSPIGS 71

  Fly   114 ILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKL 178
            .||.|...|.|.:.||..|:|||:|:.:|:|:..||:|.|:|.|.|..|:|.||:..::.||::.
  Rat    72 ALSTKLGPRPVVMTGGILAALGMLLASFATSLTHLYLSIGLLSGSGWALTFTPTLACLSRYFSQR 136

  Fly   179 RGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPR 243
            |.||.||.::|..:.|....||.:|||..|.:.|:.|::..::|::........|:         
  Rat   137 RSLAMGLALTGVGISSFAFAPLFQWLLNNYAWRGALLLVSALSLHLVACGALLRPL--------- 192

  Fly   244 ARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAV 308
                  ::.|:..:|              ...|....|..:.|             |:|      
  Rat   193 ------SLTEDTAVG--------------GPWAQITSLLCHGP-------------FLR------ 218

  Fly   309 VQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRL 373
                                                      |.|        .|||.|      
  Rat   219 ------------------------------------------YTV--------ALTLIN------ 227

  Fly   374 SKRSPSTSSFL-YVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQ 437
                  |..|: ||....|...|.:.|                                      
  Rat   228 ------TGYFIPYVHLVAHLQDLGWDP-------------------------------------- 248

  Fly   438 AQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSAT 502
                                                    ||            :|:||||.:.:
  Rat   249 ----------------------------------------LP------------AAFLLSVAAIS 261

  Fly   503 DLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITA 567
            ||:||:....|.|....|.....:...:::|:||||.|.|...:::......:|..||....:..
  Rat   262 DLVGRVASGWLGDAVPGPVARLLMLWTTLTGVSLALFPVAQASTTLVVLAVAYGFTSGALTPVAF 326

  Fly   568 VIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGASLWSFM 632
            .::.:::||.|:....|:...:..:..|:|.||..|..:...:|...|...|..||||:.:...:
  Rat   327 SVIPELVGTGRIYCGLGLVQMIESVGGLLGAPLSGYLRDVTGNYTASFVVAGAFLLAGSGVLITL 391

  Fly   633 P 633
            |
  Rat   392 P 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 130/586 (22%)
MFS 59..>234 CDD:119392 59/174 (34%)
MFS <449..633 CDD:119392 40/183 (22%)
Slc16a13NP_001005530.1 MFS_MCT11_13 13..392 CDD:340981 123/578 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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