DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and AT5G45275

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_974886.1 Gene:AT5G45275 / 2746193 AraportID:AT5G45275 Length:570 Species:Arabidopsis thaliana


Alignment Length:277 Identity:57/277 - (20%)
Similarity:93/277 - (33%) Gaps:86/277 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 VSLINKKDDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIP 98
            |..:|..|.|.:  :..|.        |.|.|.::   |....|:|..|...:|....:. .|:.
plant   308 VRAVNTPDQKSF--IEDDD--------GCCCTKVI---TRNQLGMLGEEHPLSFLLCRSD-FWLY 358

  Fly    99 ALCYF-------LYS-SLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIE--------- 146
            .:.||       :|| :||.::..|.......|:..|..:.:..|.:||.....|.         
plant   359 YIAYFCGGTIGLVYSNNLGQIAQSLGQSSETTTLVTLYSSFSFFGRLLSATPDYIRAKVYFARTG 423

  Fly   147 -------------FLYISYG---------VLVGIGAGLSFPPTVYIVTSYFA-KLRGLANGLCIS 188
                         ||..|.|         .|:|:.:|..|...|.|.:..|. ...|:.:.:.|:
plant   424 WLAVALLPTTIALFLLASSGSLAALQAGTALIGLSSGFIFAAAVSITSELFGPNSVGVNHNILIT 488

  Fly   189 GSALGSIILPPLLRWLLETYGYHGS---------------------CLIMGGITLNVFVAALFYE 232
            ...:||::...|...:.|::...||                     ||.:.|:..:|   .||  
plant   489 NIPIGSLVYGFLAALVYESHSVAGSKTESVICMGRDCYLQTFMWWGCLSVIGLASSV---VLF-- 548

  Fly   233 PVEQHMVRVPRARQALE 249
                  :|..||.|..|
plant   549 ------LRTRRAYQRFE 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 46/236 (19%)
MFS <451..633 CDD:475125
AT5G45275NP_974886.1 Nodulin-like 7..241 CDD:284279
MFS <355..547 CDD:475125 37/194 (19%)
Blue background indicates that the domain is not in the aligned region.

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