DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and Slc16a2

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_671749.2 Gene:Slc16a2 / 259248 RGDID:628608 Length:545 Species:Rattus norvegicus


Alignment Length:605 Identity:116/605 - (19%)
Similarity:208/605 - (34%) Gaps:196/605 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFS----EFTDAFNSSPTKAAWIPALCYFLYSSLG 109
            ||:||:||:|:..:...|..|.|...|.|:|:|    |..:.......:|||:.||...:.....
  Rat   100 PPEGGFGWIVVFAATWCNGSIFGIHNSVGILYSMLLEEEKEKNRQVEFQAAWVGALAMGMIFFCS 164

  Fly   110 PVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSY 174
            |:.||.:.:...|.....|.|.|.:|:..|.:.||:...|.:||:|.|.|...:|.|::.|:..|
  Rat   165 PIVSIFTDRLGCRITATTGAAVAFIGLHTSSFTSSLSLRYFTYGILFGCGCSFAFQPSLVILGHY 229

  Fly   175 FAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMV 239
            |.:..|||||:..:||::.|:..|.|::.|                                   
  Rat   230 FQRRLGLANGVVSAGSSIFSMSFPFLIKML----------------------------------- 259

  Fly   240 RVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSA 304
                                                                             
  Rat   260 ----------------------------------------------------------------- 259

  Fly   305 SAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSS 369
                       ||.           ::|.|..|..                              
  Rat   260 -----------GDR-----------IKLAQTFQVL------------------------------ 272

  Fly   370 KSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDA 434
                       |:|::|.|..   :|:::|...||.               |:..:.|::    .
  Rat   273 -----------STFMFVLTLL---SLTYRPLLPSSQ---------------DTPSKRGAH----T 304

  Fly   435 RGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSV- 498
            ..|....|..|:|::.:.:...|.:.....:..|:.|....:.|..:.|.: |.:....::|.| 
  Rat   305 LRQRFLVQFRKYFNMRVFRQRTYRIWAFGIAAAALGYFVPYVHLMKYVEDK-FKEIKETWVLLVC 368

  Fly   499 VSATDLIGRIGGSALSDMGYIP---KTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASG 560
            :.||..:||:....:||.  ||   |.:..|....:.||...::|....:..:...|...||..|
  Rat   369 IGATSGLGRLVSGHISDS--IPGLKKIYLQVLSFLLLGLMSMMIPLCRDFGGLIVVCLFLGLCDG 431

  Fly   561 IYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAG 625
            .::.|.|.|..:::|..:.:.:.|..|.:..|..:.|||:.........:|:..|:..|:..:.|
  Rat   432 FFITIMAPIAFELVGPMQASQAIGYLLGMMALPMIAGPPIAGLLRNCFGNYHVAFYFAGVPPIIG 496

  Fly   626 ASLWSFMPWINRRKANAEEQ 645
            |.:..|:|.:::|....|::
  Rat   497 AVILFFVPLMHQRMFKKEQR 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 116/605 (19%)
MFS 59..>234 CDD:119392 46/178 (26%)
MFS <449..633 CDD:119392 41/187 (22%)
Slc16a2NP_671749.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..98
2 X 22 AA approximate tandem repeats 29..72
Trypan_PARP <65..104 CDD:424334 2/3 (67%)
MFS_MCT8_10 106..504 CDD:340978 109/585 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 514..545 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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