DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and Slc16a4

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_666248.1 Gene:Slc16a4 / 229699 MGIID:2385183 Length:500 Species:Mus musculus


Alignment Length:628 Identity:137/628 - (21%)
Similarity:249/628 - (39%) Gaps:137/628 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RHKTVSLINKKDDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKA 94
            :.||.|...|         |.||||||:|:|...|.|:.:.|..|:|.:.|..|.:.|..:..:.
Mouse     4 KEKTPSPYTK---------PLDGGWGWMVVLHFFLVNVFVMGMTKTFAIFFVVFQEEFEGTSEQI 59

  Fly    95 AWIPALCYFLYSSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIG 159
            .||.::...|..|.||:::|:......:..::||....|.|.::|.||:.|.||.::.|:|.|:|
Mouse    60 GWIGSIMSSLRFSAGPLAAIICDVLGEKATSILGTFLVSGGYVISSWATGIPFLCVTMGLLPGLG 124

  Fly   160 AGLSFPPTVYIVTSYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNV 224
            :...:.....::|.||.|..||:..:..||..| :.:|.|..::|::.|.:.|:.::.|.|.||:
Mouse   125 SAFLYQVAAVVITKYFKKRLGLSTAIARSGMGL-TFLLAPFTKFLIDLYDWTGALILFGAIILNL 188

  Fly   225 FVAALFYEPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSP 289
            ..:::...|:....          .|..:.|:.|.::.             |.:|...|.:..|.
Mouse   189 VPSSMLLRPIHSQS----------NNNSDIENKGSILS-------------ATEPEASYKTETSK 230

  Fly   290 LYLPGDERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVP 354
            .                          .|.|....|.||..:..|...|.|  .|.:||..::  
Mouse   231 C--------------------------KETQEPFIKDSTMKKSEQPTTTLT--VLGNQSEEFS-- 265

  Fly   355 EGRSSSNKLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHA 419
             .|...|:..|.::.||...|                  .:|:..|:                  
Mouse   266 -NRPHRNRPLLMSNGKSHKKK------------------FVSWNCKQ------------------ 293

  Fly   420 GDSTGQDGSYADVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSF--- 481
                                     |..|:||.::|.:.:...|...:.::|     .:|:|   
Mouse   294 -------------------------KLLDISLFRNPFFYIFTWSFLLSQLAY-----FIPTFHLV 328

  Fly   482 --GEARGFNKSLSAYLLSVVSATDLIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAWT 544
              .:..|.:...::||:||...|:.:.::....::|..:|.|..|....|.:.|::..|.|.|.|
Mouse   329 ARAKTLGIDVMDASYLVSVAGITETVSQLISGWIADQNWIKKYQYHKSYLILCGVTNLLAPLATT 393

  Fly   545 YSSVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVN 609
            :..:..:..||.:.:|.|:.:...::.|:....|:....|.:.|..|:..|.|||:..:.::...
Mouse   394 FPLLMAYTILFAIFAGGYLALILPVLVDLSKNSRVHKFLGYASFFAGIAVLSGPPIAGWIYDYTQ 458

  Fly   610 DYNPLFHALGLT-LLAGASLWSFMPWINRRKANAEEQLDAQIE 651
            .|...|:..|.. :|:..||: |:|...|.|....:.|...|:
Mouse   459 TYTGSFYFSGTCYILSSVSLF-FVPLAERWKRKQSDLLRTTIK 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 133/609 (22%)
MFS 59..>234 CDD:119392 48/174 (28%)
MFS <449..633 CDD:119392 43/189 (23%)
Slc16a4NP_666248.1 2A0113 7..479 CDD:273325 129/601 (21%)
MFS 24..482 CDD:119392 120/579 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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