DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and Slc16a5

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001074403.1 Gene:Slc16a5 / 217316 MGIID:2443515 Length:468 Species:Mus musculus


Alignment Length:606 Identity:136/606 - (22%)
Similarity:225/606 - (37%) Gaps:181/606 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 DGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSSIL 115
            ||.|.|:|||.|.:|..|..|.....||.|::....|.:|.::.:|.|::...:....||:.|||
Mouse     9 DGRWAWVVLLSSLVTQALTLGFPTCIGVFFTDLQRDFQASNSETSWFPSILGAMVHGGGPLCSIL 73

  Fly   116 SVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLRG 180
            ...:..|...:|||..|||||::|.::.|:..|:::.||:.|:|...||..::.:|..||.:.|.
Mouse    74 VKHFGCRVTMMLGGVLASLGMVVSTFSGSLTHLFLTAGVITGLGMCFSFQSSITVVGLYFVRRRP 138

  Fly   181 LANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRAR 245
            |||.|...|.::|..:.|.|.|:||||.|:.|:.||.|||.|:..|......||           
Mouse   139 LANALASMGLSMGVTLWPLLARYLLETLGWRGAFLIFGGILLHCCVCGALLRPV----------- 192

  Fly   246 QALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAVVQ 310
             |...:|                     ||.:.||||...|              .||..|..|.
Mouse   193 -ATNEVP---------------------EPKEDPLLPPKIP--------------TRSCLATCVS 221

  Fly   311 S--YSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRL 373
            :  |..:.|              :.:.|..|         .:|.        ..:|..|     |
Mouse   222 TIRYHLAFD--------------ILRHNMGF---------CIYV--------TGVTWMN-----L 250

  Fly   374 SKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQA 438
            ....|..  ||.....:||                                              
Mouse   251 GFALPHI--FLVPYAMHHG---------------------------------------------- 267

  Fly   439 QQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATD 503
                          .|..:..:|:|    .:.:.| |.|.|..|......|||:||         
Mouse   268 --------------VDDYWAAMLMS----IVGFCN-IFLRPMAGLLLAGRKSLAAY--------- 304

  Fly   504 LIGRIGGSALSDMGYIPKTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLA-SGIYVGITA 567
                             :.:.|...:.|:||:..:...:..:..:..:|.::.|: .|:.:.:..
Mouse   305 -----------------RKYLFAVAILINGLTNLICTVSADFRVLLGYCLVYSLSMCGVGILVFQ 352

  Fly   568 VIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGASLWSFM 632
            |:| |::..:|..|:.|:...:.|:..|:.|||.....:..|:::.:|:.....|::| ||...:
Mouse   353 VLM-DIVPMDRFPSALGLFTILCGVTSLISPPLAGLLLDKTNNFSYVFYMSSGFLVSG-SLILGV 415

  Fly   633 PWINRRKANAEEQLDAQIEKA 653
            .:....|...::...|::|.|
Mouse   416 GFYAAEKKKLKQDGQAKMENA 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 135/604 (22%)
MFS 59..>234 CDD:119392 62/174 (36%)
MFS <449..633 CDD:119392 37/184 (20%)
Slc16a5NP_001074403.1 2A0113 8..461 CDD:273325 136/606 (22%)
MFS 32..413 CDD:119392 121/558 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..468 3/8 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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