DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and Slc16a11

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_694721.2 Gene:Slc16a11 / 216867 MGIID:2663709 Length:447 Species:Mus musculus


Alignment Length:595 Identity:123/595 - (20%)
Similarity:213/595 - (35%) Gaps:209/595 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSS 113
            ||||||||:|...:...|.|..|.::|.|:...:..:.|..|....||:.||...:..:..||.|
Mouse     8 PPDGGWGWVVAAAAFAVNGLSYGLLRSLGLALPDLAEHFERSAQDTAWVSALALAVQQAASPVGS 72

  Fly   114 ILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKL 178
            .||.::..|.|.::||...|||::.|.:|.|:..||:..|:|.|.|..|.|.|.:..::.||::.
Mouse    73 ALSTRWGARPVVMVGGVLTSLGLVFSAFARSLLHLYLGLGLLAGSGWALVFAPALGTLSRYFSRR 137

  Fly   179 RGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPR 243
            |.||.||.::|:...|::|.|.|::||:|:|:.|:.|::|.:||:                    
Mouse   138 RVLAVGLALTGNGASSLLLAPALQFLLDTFGWRGALLLLGAVTLH-------------------- 182

  Fly   244 ARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAV 308
                                                |.|..:...||.|.||             
Mouse   183 ------------------------------------LTPCGALLRPLALSGD------------- 198

  Fly   309 VQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRL 373
                                |:..|:     ||        |.|:..|                 
Mouse   199 --------------------PLAPPR-----TP--------LAALGLG----------------- 213

  Fly   374 SKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQA 438
                                  .|:.:.|       |:.:.||...|..                
Mouse   214 ----------------------LFKRRAF-------SVFALGTALIGGG---------------- 233

  Fly   439 QQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATD 503
                              |.|..:....:|:.              :|.....:|.:::|.:..|
Mouse   234 ------------------YFVPYVHLGPHALD--------------QGMGGYGAALVVAVAAVGD 266

  Fly   504 LIGRIGGSALSDMGYIPKTWYFVGGLSISG---LSLALLPFAWTYSSVCFWCA-------LFGLA 558
            ...|:....|:|.|::|.....|...|::|   |::.|:|...|...   |.|       .:||:
Mouse   267 ACARLASGWLADQGWVPLPRLLVVFGSLTGLGVLAMGLVPTVGTEEG---WGAPLLAAAGAYGLS 328

  Fly   559 SGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLL 623
            :|.|..:...::..::|...:..:.|:.:.:..|..|:||||..:..:...|::..|......:|
Mouse   329 AGSYAPLVFGVLPGLVGIGGVVQATGLVMMLMSLGGLLGPPLSGFLRDKTGDFSASFLVCSSFIL 393

  Fly   624 AGASLWSFMP 633
            :|:.::..:|
Mouse   394 SGSFIYMGLP 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 123/595 (21%)
MFS 59..>234 CDD:119392 56/174 (32%)
MFS <449..633 CDD:119392 37/193 (19%)
Slc16a11NP_694721.2 MFS 14..403 CDD:391944 116/587 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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