DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and Slc16a2

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_033223.2 Gene:Slc16a2 / 20502 MGIID:1203732 Length:545 Species:Mus musculus


Alignment Length:612 Identity:120/612 - (19%)
Similarity:213/612 - (34%) Gaps:197/612 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFS----EFTDAFNSSPTKAAWIPALCYFLYSSLG 109
            ||:||:||:|:..:...|..|.|...|.|:|:|    |..:.......:|||:.||...:.....
Mouse   100 PPEGGFGWIVVFAATWCNGSIFGIHNSVGILYSMLLEEEKEKNRQVEFQAAWVGALAMGMIFFCS 164

  Fly   110 PVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSY 174
            |:.||.:.:...|.....|.|.|.:|:..|.:.||:...|.:||:|.|.|...:|.|::.|:..|
Mouse   165 PIVSIFTDRLGCRITATTGAAVAFIGLHTSSFTSSLSLRYFTYGILFGCGCSFAFQPSLVILGHY 229

  Fly   175 FAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMV 239
            |.:..|||||:..:||::.|:..|.|::.|                                   
Mouse   230 FQRRLGLANGVVSAGSSIFSMSFPFLIKML----------------------------------- 259

  Fly   240 RVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSA 304
                                                                             
Mouse   260 ----------------------------------------------------------------- 259

  Fly   305 SAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSS 369
                       ||:           ::|.|..|..                              
Mouse   260 -----------GDK-----------IKLAQTFQVL------------------------------ 272

  Fly   370 KSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDA 434
                       |:|::|.|..   :|:::|...||.               |:..:.|::    .
Mouse   273 -----------STFMFVLTLL---SLTYRPLLPSSQ---------------DTPSKRGAH----T 304

  Fly   435 RGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSV- 498
            ..|....|..|:|::.:.:...|.:.....:..|:.|....:.|..:.|.: |.:....::|.| 
Mouse   305 LRQRFLVQFRKYFNMRVFRQRTYRIWAFGIAAAALGYFVPYVHLMKYVEDK-FKEIKETWVLLVC 368

  Fly   499 VSATDLIGRIGGSALSDMGYIP---KTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASG 560
            :.||..:||:....:||.  ||   |.:..|....:.||...::|....:..:...|...||..|
Mouse   369 IGATSGLGRLVSGHISDS--IPGLKKIYLQVLSFLLLGLMSMMIPLCRDFGGLIVVCLFLGLCDG 431

  Fly   561 IYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAG 625
            .::.|.|.|..:::|..:.:.:.|..|.:..|..:.|||:.........||:..|:..|:..:.|
Mouse   432 FFITIMAPIAFELVGPMQASQAIGYLLGMMALPMIAGPPIAGLLRNCFGDYHVAFYFAGVPPIIG 496

  Fly   626 ASLWSFMPWINRRKANAEEQLDAQIEK 652
            |.:..|:|.:::|... :||.|:..:|
Mouse   497 AVILFFVPLMHQRMFK-KEQRDSSKDK 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 120/612 (20%)
MFS 59..>234 CDD:119392 46/178 (26%)
MFS <449..633 CDD:119392 42/187 (22%)
Slc16a2NP_033223.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..98
2 X 22 AA approximate tandem repeats 29..72
2A0111 92..519 CDD:331689 119/607 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 514..545 4/9 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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