DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and Slc16a1

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_033222.1 Gene:Slc16a1 / 20501 MGIID:106013 Length:493 Species:Mus musculus


Alignment Length:627 Identity:145/627 - (23%)
Similarity:240/627 - (38%) Gaps:195/627 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLT---NILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGP 110
            ||||||||.||:|:.::   :...|   ||..|.|.|....|:::.::.:||.::...:..:.||
Mouse    13 PPDGGWGWAVLVGAFISIGFSYAFP---KSITVFFKEIEVIFSATTSEVSWISSIMLAVMYAGGP 74

  Fly   111 VSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYF 175
            :||||..||..|.|.:.||..:..|:|.:.:.::::.||:..||:.|:|...:..|.:.::..||
Mouse    75 ISSILVNKYGSRPVMIAGGCLSGCGLIAASFCNTVQELYLCIGVIGGLGLAFNLNPALTMIGKYF 139

  Fly   176 AKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVR 240
            .|.|.|||||.::||.:....|.||.:...:.:.:.||.||:||:.||..||.....|:.     
Mouse   140 YKKRPLANGLAMAGSPVFLSTLAPLNQAFFDIFDWRGSFLILGGLLLNCCVAGSLMRPIG----- 199

  Fly   241 VPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSAS 305
                       ||:      :|.|                                         
Mouse   200 -----------PEQ------VKLE----------------------------------------- 206

  Fly   306 AAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSK 370
                                                 :|.|:.||...  |:|.:|...:..|.|
Mouse   207 -------------------------------------KLKSKESLQEA--GKSDANTDLIGGSPK 232

  Fly   371 SRLSKRSPSTSSFLYVSTPYHGSTLS-FQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDA 434
                                 |..|| ||                                    
Mouse   233 ---------------------GEKLSVFQ------------------------------------ 240

  Fly   435 RGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVV 499
                   ..:||.||||.....:|:.|..|..........::.|.|:|:::.|:...||:|||::
Mouse   241 -------TINKFLDLSLFTHRGFLLYLSGNVVMFFGLFTPLVFLSSYGKSKDFSSEKSAFLLSIL 298

  Fly   500 SATDLIGRIGGSALSDMGYIPKT--------WYFVGGLSISGLSLALLPFAWTYSSVCFWCALFG 556
            :..|::.|      ..||....|        ::|...:..:|:...|.|.:.||...|.:..:||
Mouse   299 AFVDMVAR------PSMGLAANTKWIRPRIQYFFAASVVANGVCHLLAPLSTTYVGFCVYAGVFG 357

  Fly   557 LASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLT 621
            .|.|....:....:.|::|.:|.:|:.|:...|.....|:||||.....:...||...:.|.|:.
Mouse   358 FAFGWLSSVLFETLMDLIGPQRFSSAVGLVTIVECCPVLLGPPLLGRLNDMYGDYKYTYWACGVI 422

  Fly   622 L-LAGASLWSFMPWINRR------KANAEEQLDAQIEKAAVD 656
            | :||..|:..| .||.|      ||..:::.:.:.::|:.|
Mouse   423 LIIAGIYLFIGM-GINYRLLAKEQKAEEKQKREGKEDEASTD 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 59/178 (33%)
MFS <451..633 CDD:475125 48/190 (25%)
Slc16a1NP_033222.1 2A0113 1..466 CDD:273325 145/627 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 447..493 3/17 (18%)

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