DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and mct-5

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_495464.2 Gene:mct-5 / 187995 WormBaseID:WBGene00020168 Length:591 Species:Caenorhabditis elegans


Alignment Length:644 Identity:157/644 - (24%)
Similarity:271/644 - (42%) Gaps:131/644 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVS 112
            :||||||||:|::||...::...|.:.|||:|..:....|||:.|..:.|.::........||::
 Worm    13 LPPDGGWGWVVVIGSFFIHVFADGFVYSFGILAEKLMIEFNSNNTMTSLIVSMLTGFTLGAGPLA 77

  Fly   113 SILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAK 177
            |.:..||..|..|::|...|.:|.:||.:|:.|....||.||::|||.||.:.|.:.|||.||..
 Worm    78 SAVCNKYGCRITTIIGAGVAFVGCLLSCFATEIWHFVISVGVIMGIGFGLVYCPAIVIVTMYFES 142

  Fly   178 LRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALF-----------Y 231
            .|.||.|:.::|:.:|:::..|:..:::..||:.           .|||..||           :
 Worm   143 KRSLATGIAVAGAGVGAVVFGPINTFIISNYGWR-----------YVFVLFLFVIILCAVCGATF 196

  Fly   232 EPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYN----------SP 286
            .|::..:|            |:::|.|   ::.:|.|...|.       :.||          ||
 Worm   197 VPLQFALV------------PDDDDDG---EYNDVFEDEVKK-------IDYNKRFEEKVSLLSP 239

  Fly   287 PSPLYLPGDERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLY 351
            |..|                                .|.:|....:.:.||...|     .||:.
 Worm   240 PQVL--------------------------------ERSMSQCCDIQKNNQHARP-----SSSVG 267

  Fly   352 AV---PEGRSSSNKLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGS 413
            ||   |..|.....:..|||  ..|:::     ...|..:..:.:.....|.::.|..||.:..:
 Worm   268 AVDLEPLLRPRCGTIGERNS--GYLNRK-----DVFYTGSISNVAEFRANPDKYRSTGSLHTALN 325

  Fly   414 SGTGHAGDSTGQD---GSYADVDARGQAQQPQR---------------SKFFDLSLLKDPMYLVI 460
            ..|.|.| :.|.|   |...|....|..::.:.               :..|...||.||.:|:.
 Worm   326 IHTHHTG-TVGDDRESGHGCDQSLDGMNEKKETDFMDDIEGSNMFKTINNMFSFQLLLDPAFLLF 389

  Fly   461 LISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATDLIGRIGGSALSDMGY-IP---- 520
            .|||...::.:.:.:..||........:.::|..:|||....:.|||:....::|... :|    
 Worm   390 AISNLLTSVGFNSPLYFLPLHVTNILSDNNVSGNILSVYGTANTIGRLIFGVVADQKLPLPAGLG 454

  Fly   521 ------KTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLGTERL 579
                  :.|.:...|:|.|:..|.......|..:..:..|||.....||.:|:||:.|:||.::|
 Worm   455 DDTARNRLWMYNISLTICGIVTAFCYKFDGYILLDIYAVLFGFTIASYVCLTSVILVDLLGLDKL 519

  Fly   580 TSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGASLWSFMPWINRR 638
            |:::|:.|...|:..::||.:..|..:...:|...|...|:.|:....:...:|:..|:
 Worm   520 TNAFGLLLLWQGVGTVIGPLVSGYLADLTGNYTLSFVFCGINLMVSGLMLFVIPYFKRK 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 58/186 (31%)
MFS <451..633 CDD:475125 48/192 (25%)
mct-5NP_495464.2 MFS_MCT_SLC16 20..573 CDD:340910 149/630 (24%)

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