DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and mct-5

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_495464.2 Gene:mct-5 / 187995 WormBaseID:WBGene00020168 Length:591 Species:Caenorhabditis elegans


Alignment Length:644 Identity:157/644 - (24%)
Similarity:271/644 - (42%) Gaps:131/644 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VPPDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVS 112
            :||||||||:|::||...::...|.:.|||:|..:....|||:.|..:.|.::........||::
 Worm    13 LPPDGGWGWVVVIGSFFIHVFADGFVYSFGILAEKLMIEFNSNNTMTSLIVSMLTGFTLGAGPLA 77

  Fly   113 SILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAK 177
            |.:..||..|..|::|...|.:|.:||.:|:.|....||.||::|||.||.:.|.:.|||.||..
 Worm    78 SAVCNKYGCRITTIIGAGVAFVGCLLSCFATEIWHFVISVGVIMGIGFGLVYCPAIVIVTMYFES 142

  Fly   178 LRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALF-----------Y 231
            .|.||.|:.::|:.:|:::..|:..:::..||:.           .|||..||           :
 Worm   143 KRSLATGIAVAGAGVGAVVFGPINTFIISNYGWR-----------YVFVLFLFVIILCAVCGATF 196

  Fly   232 EPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYN----------SP 286
            .|::..:|            |:::|.|   ::.:|.|...|.       :.||          ||
 Worm   197 VPLQFALV------------PDDDDDG---EYNDVFEDEVKK-------IDYNKRFEEKVSLLSP 239

  Fly   287 PSPLYLPGDERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLY 351
            |..|                                .|.:|....:.:.||...|     .||:.
 Worm   240 PQVL--------------------------------ERSMSQCCDIQKNNQHARP-----SSSVG 267

  Fly   352 AV---PEGRSSSNKLTLRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGS 413
            ||   |..|.....:..|||  ..|:::     ...|..:..:.:.....|.::.|..||.:..:
 Worm   268 AVDLEPLLRPRCGTIGERNS--GYLNRK-----DVFYTGSISNVAEFRANPDKYRSTGSLHTALN 325

  Fly   414 SGTGHAGDSTGQD---GSYADVDARGQAQQPQR---------------SKFFDLSLLKDPMYLVI 460
            ..|.|.| :.|.|   |...|....|..::.:.               :..|...||.||.:|:.
 Worm   326 IHTHHTG-TVGDDRESGHGCDQSLDGMNEKKETDFMDDIEGSNMFKTINNMFSFQLLLDPAFLLF 389

  Fly   461 LISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATDLIGRIGGSALSDMGY-IP---- 520
            .|||...::.:.:.:..||........:.::|..:|||....:.|||:....::|... :|    
 Worm   390 AISNLLTSVGFNSPLYFLPLHVTNILSDNNVSGNILSVYGTANTIGRLIFGVVADQKLPLPAGLG 454

  Fly   521 ------KTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLGTERL 579
                  :.|.:...|:|.|:..|.......|..:..:..|||.....||.:|:||:.|:||.::|
 Worm   455 DDTARNRLWMYNISLTICGIVTAFCYKFDGYILLDIYAVLFGFTIASYVCLTSVILVDLLGLDKL 519

  Fly   580 TSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGASLWSFMPWINRR 638
            |:::|:.|...|:..::||.:..|..:...:|...|...|:.|:....:...:|:..|:
 Worm   520 TNAFGLLLLWQGVGTVIGPLVSGYLADLTGNYTLSFVFCGINLMVSGLMLFVIPYFKRK 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 157/643 (24%)
MFS 59..>234 CDD:119392 55/185 (30%)
MFS <449..633 CDD:119392 48/194 (25%)
mct-5NP_495464.2 MFS_MCT_SLC16 20..573 CDD:340910 149/630 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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