DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and mct-3

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_510308.1 Gene:mct-3 / 181497 WormBaseID:WBGene00010834 Length:596 Species:Caenorhabditis elegans


Alignment Length:666 Identity:150/666 - (22%)
Similarity:287/666 - (43%) Gaps:112/666 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DHKPNGNTNESRHKTVSLINKKDDKEYDLVPPDGGWGWLVLLGSCLTNILIPGTIKSFG-VLFSE 82
            |:....:...:.|:....:.|:.:....:.|||||:||.::..|.|.|:::.|.|.:.| :|...
 Worm     3 DNNQQADEKAAAHQDPETVEKELEDAGFIAPPDGGYGWAIVAASFLLNMIVDGVIFTVGKILQPA 67

  Fly    83 FTDAFNSSPTKAAWIPAL---CYFLYSSLGPVSSILSVKYSYRTVTLLGGASASLGMILSFWASS 144
            :..:|..|...||...::   |||.   .||::|:|...:..|.|.|.|...|:||.:||..|.:
 Worm    68 WVHSFGISEASAAMTMSILSGCYFF---AGPIASVLCNVFGCRQVALAGSLIAALGFLLSISAPN 129

  Fly   145 IEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLRGLANGLCISGSALGSIILPPL--LRWLLET 207
            |..||:|:|::.|.|.|:.:.|.:.|::.||||.|.:|.|:.:.||.:|:.:...|  :.|....
 Worm   130 IYVLYVSFGLIAGAGFGMMYLPAIVIISQYFAKKRSVATGIAVCGSGIGTTVFALLNDVVWDFVG 194

  Fly   208 YGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPK 272
            ..:....:....:|::...|.:...|::....::.:..:.||:            :|...|.|| 
 Worm   195 GDWKQFLVYTAAVTISGLGACILLRPLKPSKDQIEKVAKVLED------------YEEHKEKVP- 246

  Fly   273 NEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQ 337
                :.|||                               ||....|.| |.::.|..:|...:.
 Worm   247 ----ESPLL-------------------------------SKHNTPFLS-SLELHTAGKLENGHH 275

  Fly   338 TFTPGQLNSQSSLYAVPEGRSSSNKLTLR-----NSSKSRLSKRSPSTSSFLYVSTPYHGSTLSF 397
            |   |.:  :|.:.||.:.....||..||     :.|.:.::.|| .|.:........|..:|.|
 Worm   276 T---GSI--KSIVDAVSKEIEDLNKPLLRKDIFYSGSTTNIAARS-RTGTMTREEAAEHQQSLRF 334

  Fly   398 Q-----PKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADV----DARGQAQQPQRSKFFDLSLLK 453
            :     |:::.|...|         :|||:       .||    :::.|..:....:..|..||.
 Worm   335 RGKVETPQQYLSKADL---------NAGDN-------GDVAIANESKIQEIKQALKQLVDKELLF 383

  Fly   454 DPMYLVILISNS-TNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATDLIGRIGGSALSDMG 517
            .|.:|::..|.: |....|..||.|.....:..|...:..::.:|::...:::.|||...|:|. 
 Worm   384 SPSFLLLAFSGTLTLCCFYVPFIYLGNHLDKIEGLTTAEKSFTVSLIGVLNIVARIGCGILADR- 447

  Fly   518 YIPKTWYFVGGLSI-------SGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLG 575
              |:    |..|::       :||:...:|....|.....:|..|.:....:..:.::|:.:::|
 Worm   448 --PE----VSALAVNNFALIAAGLATMTVPLYTAYWQFLAFCVPFSIGVACFAALRSIIVVELIG 506

  Fly   576 TERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGASLWSFMPWINRRKA 640
            .|:|::::||.|...|:..:||.||.....:...:::..|:.:|..:....::...:..:.:|:.
 Worm   507 LEKLSNAFGILLTFMGVGAVVGSPLAAAMKDYTGNFDTSFYVMGALMTISGAMCIPLGGLRKREL 571

  Fly   641 NAEEQLDAQIEKAAVD 656
            ...:..||   |.|::
 Worm   572 ARSDSSDA---KKAIE 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 145/631 (23%)
MFS 59..>234 CDD:119392 52/180 (29%)
MFS <449..633 CDD:119392 40/191 (21%)
mct-3NP_510308.1 MFS_MCT_SLC16 39..563 CDD:340910 137/604 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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