DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and LOC1280341

DIOPT Version :10

Sequence 1:NP_610174.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:XP_061511715.1 Gene:LOC1280341 / 1280341 VectorBaseID:AGAMI1_002494 Length:703 Species:Anopheles gambiae


Alignment Length:704 Identity:165/704 - (23%)
Similarity:297/704 - (42%) Gaps:143/704 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSSI 114
            |||||||:|:....|.||:|...::|||::|.:.....:.|.|||:.|..|...:..:||..:..
Mosquito    24 PDGGWGWMVVFAYGLANIMIVPVLQSFGLIFRDTFREIDISATKASIIINLASAVGMALGLFNGP 88

  Fly   115 LSVKYSYRTVTLLGGASASLGMILSFWASSIEFLY--ISYGVLVGIGAGLSFPPTVYIVTSYFAK 177
            |..:|.:|.:.:.||...|.|::|:  :|::.|.:  |:|.::..:|.|.........:.:||.:
Mosquito    89 LLRRYGFRKLAVAGGFLFSAGLMLT--SSAVHFAHFIITYSIISSLGMGFCNSSFSLALNTYFVE 151

  Fly   178 LRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVP 242
            .|..|.|:.::.:.||.|:||.|:..||..||.....||:|.:..::...||..:||:.|.:..|
Mosquito   152 RRNKAAGIAMTITGLGPILLPQLVSLLLTLYGARYCLLIIGALATHIIAGALLLQPVKWHTLPAP 216

  Fly   243 R-----ARQALENIPEEEDIGIV-MKF---ENVDEPVPKNEPADKPLL----------------- 281
            .     .:.|:...|...::.|| ::|   :..||...::|..:|...                 
Mosquito   217 SPPPADQQDAMLPCPPLPEVKIVPIEFGADDGADEAKEEDEFLEKGSYIDHDLDAQSVYGFELTS 281

  Fly   282 ------PYNSPPSPLYLPGDERLQFVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFT 340
                  .::.||.. ::....|:|..:|...|..|..:     .::||.|:.:....|.|  .|.
Mosquito   282 QIRQRESFSQPPGG-FISAAPRIQRAKSEVLAPAQQCA-----LETRSLKVESSTARPLR--WFQ 338

  Fly   341 PGQLNS---QSSLYAVPEGRSSSNKLTLRNSSKSRLSKRSPST---SSFLYVS-TP-----YHGS 393
            .|...|   .||| .:.:.|:||  |||...::|: .:|.||.   ||::.|. :|     :.||
Mosquito   339 SGSAESVHLGSSL-TMWDDRNSS--LTLAEETQSQ-QQRRPSQRRFSSYINVRFSPLPKRWFEGS 399

  Fly   394 ----TLSFQPKEFSSHLSLRSMGSSGTGHA-GDSTGQ---------------------------- 425
                .|....|.|....:....||.|:|.| |...|:                            
Mosquito   400 ADTVNLGSSMKIFDERYAGPRRGSLGSGVALGGGGGKLPALSENQGLTDEATHLPTIVRQLENTK 464

  Fly   426 ----------------DGSYADVDARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNF 474
                            ||.:|.|           ...|||:||:|.:||.:::..|....:..||
Mosquito   465 VTSPPNDRPAAGGGKTDGFFAKV-----------VHLFDLTLLQDKVYLNMMLGMSIAVFAEINF 518

  Fly   475 IILLPSFGEARGFNKSLSAYLLSVVSATDLIGRIGGSALSD-MGYIPKTWYFV--GGLSISGLSL 536
            .:|.|......|::....|.::|.::..||:.|.....:.| :...|:..|.:  ..|.::..|:
Mosquito   519 SLLTPFILGDLGYSTEQIASIMSTLALADLLFRFISPFVGDYLKLTPRIMYMIALAMLIVTRFSI 583

  Fly   537 ALLPFAWTYSSVCFWCALFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGL-LQLVGP-- 598
            .|   |.:|..:.......|:|.|:.....::::...:..:||.|:..|.:..||: |..:||  
Mosquito   584 LL---ARSYDEMVLVAFGLGVAKGVRSVYMSLVIPSYIPLKRLPSASSIQMTTNGIVLMTIGPCV 645

  Fly   599 PLCNYWFEAVNDYNPLFHALGLTLLAGASLWSFMPW------INRRKANAEEQL 646
            .|...|..:        ::..:.|:.|.::.:.:.|      ::|.:..|::::
Mosquito   646 GLLRDWTGS--------YSKSIILINGFTIVTLLMWSAELIYVHRCQNRAKQKV 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_610174.1 MFS_MCT_SLC16 55..>231 CDD:340910 53/177 (30%)
MFS <451..633 CDD:475125 40/187 (21%)
LOC1280341XP_061511715.1 None

Return to query results.
Submit another query.