DRSC/TRiP Functional Genomics Resources

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Protein Alignment hrm and slc16a1a

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:NP_001243569.1 Gene:slc16a1a / 100534752 ZFINID:ZDB-GENE-110408-16 Length:461 Species:Danio rerio


Alignment Length:635 Identity:137/635 - (21%)
Similarity:233/635 - (36%) Gaps:218/635 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PPDGGWGWLVLLGSCLT---NILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGP 110
            ||:|||||.|:||:.::   :...|   ||..|.|.|....||::.::.:||.::...:....||
Zfish    13 PPEGGWGWAVVLGAFISIGFSYAFP---KSITVFFKEIEVIFNATSSQVSWISSIMLAVMYGGGP 74

  Fly   111 VSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYF 175
            |||||..||..|.:.:|||..:..|:|.:.:.:::|.||...||:.|:|...:..|.:.::..||
Zfish    75 VSSILVNKYGSRPIMILGGCLSGAGLIAASFCNTVEGLYFCVGVVGGLGLAFNLNPALTMIGKYF 139

  Fly   176 AKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVR 240
            .|.|.:|||:.::||.:....|.||..|..:.:|:.||.||:||:.||..||.....|:.     
Zfish   140 YKKRPIANGIAMAGSPVFLSTLAPLNTWFFDQFGWRGSFLILGGLLLNCCVAGSLMRPIG----- 199

  Fly   241 VPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSAS 305
                                          ||.:||.|                           
Zfish   200 ------------------------------PKPQPAVK--------------------------- 207

  Fly   306 AAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSK 370
                      .|...||:::..|.|.:           :|.                        
Zfish   208 ----------ADNSNSRAKERKTVVEV-----------ING------------------------ 227

  Fly   371 SRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDAR 435
                                                                             
Zfish   228 ----------------------------------------------------------------- 227

  Fly   436 GQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVS 500
                      |.||:|.|...:|:.|:.|........:.::.|.::.:::...:..:|:|||:::
Zfish   228 ----------FIDLTLFKHRGFLLYLLGNVVMFFGLFSPLVFLSNYAKSKQIPREKAAFLLSILA 282

  Fly   501 ATDLIGRIGGSALSDMGYIPKT-W-------YFVGGLSISGLSLALLPFAWTYSSVCFWCALFGL 557
            ..|::.|      ..||.:..| |       :|...:.::|:...|.|.:..|:....:...||.
Zfish   283 FVDMVAR------PSMGIVANTKWVRPRVQHFFAASILLNGVCHLLAPLSTDYTGFVIYAIFFGF 341

  Fly   558 ASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTL 622
            |.|....:....:.|::|.:|.:|:.|:...|.....|:||||...:.:..:||...:...|:.|
Zfish   342 AFGWLSSVLFETLMDLVGAQRFSSAVGLVTIVECGPVLLGPPLLGKFNDIYHDYKYTYMGCGIVL 406

  Fly   623 LAGASLWSFMPW-IN-----------RRKANAEEQLDAQIE---KAAVDS 657
            |.| ||:.|:.. ||           .:|||..:....::|   |||.|:
Zfish   407 LIG-SLFLFVGMGINYKLLEREAKEESKKANQHDDPGKEVEEALKAAEDN 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 133/629 (21%)
MFS 59..>234 CDD:119392 59/177 (33%)
MFS <449..633 CDD:119392 46/191 (24%)
slc16a1aNP_001243569.1 2A0113 6..446 CDD:273325 132/624 (21%)
MFS 20..415 CDD:119392 120/586 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2504
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 1 1.000 - - mtm6360
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.820

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