DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and slc16a2

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:XP_031747020.1 Gene:slc16a2 / 100494635 XenbaseID:XB-GENE-980579 Length:499 Species:Xenopus tropicalis


Alignment Length:622 Identity:123/622 - (19%)
Similarity:212/622 - (34%) Gaps:214/622 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPT-----KAAWIPALCYFLYSSLG 109
            |:||:||:|:|.:...:..|.|...|||:::.......:.:..     |.||:.:|...:.....
 Frog    52 PEGGFGWVVVLAATWCSGSIFGIQNSFGIIYVMLQGEMDGTEEQGMDFKTAWVGSLAMGMIFFCS 116

  Fly   110 PVSSILSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSY 174
            ||.||.:.:...|..:..|.|.|.:|::.|.:..|:...|.:||:|.|.|...:|.|::.|:..|
 Frog   117 PVVSIFTDRLGCRKTSSGGAALAFIGLLSSSFTKSLGVRYFTYGILFGCGCSFAFQPSLVILGHY 181

  Fly   175 FAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGI-----TLNVFVAALFYEPV 234
            |.|..||.||:...||.:.::.||.||:             :|||.     |..|....:|.:  
 Frog   182 FKKRLGLVNGIVAGGSCVFTMCLPFLLK-------------MMGGAIGLQHTFQVLSVFMFIQ-- 231

  Fly   235 EQHMVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQ 299
                                  |.:.:.|              |||||   ||.           
 Frog   232 ----------------------IFLSLTF--------------KPLLP---PPV----------- 246

  Fly   300 FVRSASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLT 364
                              :|.....|::                            |||      
 Frog   247 ------------------DFSKEKEKVA----------------------------GRS------ 259

  Fly   365 LRNSSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSY 429
                                                                             
 Frog   260 ----------------------------------------------------------------- 259

  Fly   430 ADVDARGQAQQ--PQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLS 492
                   :|||  ....|:|::.:.:...|.:..:..:|..:.|....:.|..|.|.| |.::..
 Frog   260 -------KAQQCMAHTRKYFNMQVFRRKTYTIWALGIATTVLGYFVPYVHLIKFVEQR-FKENTK 316

  Fly   493 AYLLSV-VSATDLIGRIGGSALSDMGYIP---KTWYFVGGLSISGLSLALLPFAWTYSSVCFWCA 553
            .::|.| :.||..|||:....:.|.  ||   |.:..|....:.|:...:||....:.||...|.
 Frog   317 EWVLLVCIGATSGIGRLASGRIGDS--IPGLKKIYLQVASFLLLGILSMMLPLCQVFESVIVVCL 379

  Fly   554 LFGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQL---VGPPLCNYWFEAVNDYNPLF 615
            ..||..|..:.:.:.|..:::|..:.:.:.|   :|.||:.:   .|||:.....:....|:..|
 Frog   380 FLGLCDGFLISMMSPIAFELVGPMQASQAIG---YVLGLMSIPMTAGPPIAGLLRDYCGSYDLAF 441

  Fly   616 HALGLTLLAGASLWSFMPWINRRKANAEEQLDAQIEK 652
            :..|:..|.||.:...:|.::.|....:.|::.:.||
 Frog   442 YLAGIPPLIGAMVLLSVPLVHERDLKKKRQMEEEKEK 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 123/622 (20%)
MFS 59..>234 CDD:119392 49/184 (27%)
MFS <449..633 CDD:119392 44/190 (23%)
slc16a2XP_031747020.1 MFS_MCT8 57..459 CDD:341023 115/596 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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