DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and slc16a10

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:XP_012819019.1 Gene:slc16a10 / 100488837 XenbaseID:XB-GENE-1012623 Length:516 Species:Xenopus tropicalis


Alignment Length:676 Identity:136/676 - (20%)
Similarity:234/676 - (34%) Gaps:231/676 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SQNASKINQKDHKPNG------------NTNESRHKTVSLINKKDDKEYDLVPPDGGWGWLVLLG 61
            ::..|.:|..:.|.||            ..|:.:....:..:..:|||:.  ||:|||||:|::.
 Frog    19 NEEMSPLNSVEGKENGEMDPVSIEEEKLKANDEKDPEAAKESALEDKEFQ--PPEGGWGWMVMVA 81

  Fly    62 SCLTNILIPGTIKSFGVLFSEFTDAFNSSPT-----KAAWIPALCYFLYSSLGPVSSILSVKYSY 121
            :...|..:.|...:.||||....:.|.|...     |.||:.:|...:.....||.||.:..:..
 Frog    82 AMWCNGSVFGIQNACGVLFVSLIEEFGSKDDTEMTFKTAWVNSLSMGMIFFCSPVVSIFTDIFGC 146

  Fly   122 RTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLRGLANGLC 186
            |....:|.|...:|::.|.:.||:|.||.:||:|...|...::.|::.|:..||.|..||.||:.
 Frog   147 RKTATVGAAVGIVGLLSSSFVSSLEPLYFTYGILFACGCSFAYQPSLVILGHYFKKRLGLVNGIV 211

  Fly   187 ISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRARQALENI 251
            .:||:|.::.||.:||:||:......:..::..:...:|:|...|:|:      ||| |..||  
 Frog   212 TAGSSLFTVSLPFVLRFLLDKIRLFKTLQVLCILMFILFLAGFTYKPL------VPR-RSNLE-- 267

  Fly   252 PEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVRSASAAVVQSYSKSG 316
                                                                        :.|:|
 Frog   268 ------------------------------------------------------------FKKNG 272

  Fly   317 DEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSS---LYAVPEGRSSSNKLTLRNSSKSRLSKRSP 378
                        ..|.|..|:.|......|:|.   .:.:|                        
 Frog   273 ------------KFRCPSVNKLFNFSIFKSRSYCLWAFGIP------------------------ 301

  Fly   379 STSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQAQQPQR 443
             .:.|.|. .||             .||         ..|..:..|:|                 
 Frog   302 -AALFGYF-VPY-------------VHL---------MNHVRERLGED----------------- 325

  Fly   444 SKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATDLIGRI 508
                    :|:.:                                      ||..:..|..:||:
 Frog   326 --------VKEEV--------------------------------------LLLCIGVTSGVGRL 344

  Fly   509 GGSALSDMGYIP---KTWYFVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGITAVIM 570
            ....::|  |||   |.:..|......||...::|....:..:...|...||..|.::.|.|.|.
 Frog   345 IFGRVAD--YIPGVKKVYLQVVSFFFIGLMSMMIPLCHNFGGLIAVCLFMGLFDGCFICIMAPIA 407

  Fly   571 ADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGASLWSFMPWI 635
            .:::|.|.::.:.|..|....:...||||:.....:.:..|:..|:..|:..:.|..:...:|||
 Frog   408 FELVGPENVSQAIGFLLGFMSIPMTVGPPIAGILHDRLGSYDVAFYLAGIPPIIGGIILCLIPWI 472

  Fly   636 NRR---------KANAEEQLDAQIEK 652
            ::|         ..:|||::   :||
 Frog   473 HQRTLQKKTIAVNGDAEEKM---LEK 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 127/624 (20%)
MFS 59..>234 CDD:119392 51/179 (28%)
MFS <449..633 CDD:119392 34/186 (18%)
slc16a10XP_012819019.1 MFS_MCT10 75..455 CDD:341022 111/573 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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