DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hrm and slc16a5

DIOPT Version :9

Sequence 1:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster
Sequence 2:XP_002940018.3 Gene:slc16a5 / 100485544 XenbaseID:XB-GENE-1008043 Length:455 Species:Xenopus tropicalis


Alignment Length:599 Identity:113/599 - (18%)
Similarity:211/599 - (35%) Gaps:184/599 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PDGGWGWLVLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSSLGPVSSI 114
            |||.|.|:||....||..|..|.....|:.:::...:|.:|.|:.:|.|::...:..:.||:.:|
 Frog     4 PDGPWAWVVLAAVMLTQGLSLGFPSCIGIFYTDIQTSFQASNTETSWFPSIIMAVLHAGGPLCTI 68

  Fly   115 LSVKYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVTSYFAKLR 179
            :..::..|...::||....:||:.|.::.:|..||:|.|.:.|:|....|...:.::..||.:.|
 Frog    69 MVERFGCRVTVMVGGLLCGVGMVTSAFSQTIIHLYLSAGFVGGLGFCFCFQAGITVLGYYFIRRR 133

  Fly   180 GLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQHMVRVPRA 244
            .|||.|..:|:::|..:.|...:.||||.|:.||.|:.||:.||..|.                 
 Frog   134 TLANSLASAGASIGMALWPLASQHLLETMGWRGSFLLFGGVLLNCCVC----------------- 181

  Fly   245 RQALENIPEEEDIGIVMKFENVDEPVPKNEPA-DKPLLPYNSPPSPLYLPGDERLQFVRSASAAV 308
                         |.:|:      ||...||| :|.:|   :|..|                   
 Frog   182 -------------GAIMR------PVRSLEPAHEKEVL---APEEP------------------- 205

  Fly   309 VQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRNSSKSRL 373
                                                                             
 Frog   206 ----------------------------------------------------------------- 205

  Fly   374 SKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADVDARGQA 438
                                                    :|..|.|:.|.|        .:|. 
 Frog   206 ----------------------------------------NGIKHKGEKTEQ--------GKGL- 221

  Fly   439 QQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLSVVSATD 503
               ||...||| |.:...|.:..:..:...:.:...:..|..:..:...::..:|.|||:|...:
 Frog   222 ---QRYMAFDL-LFRHRRYQIYALGVTWMVLGFVLPLFYLVPYATSNDIDEKKAALLLSLVGFMN 282

  Fly   504 LIGR-IGGSALSDMGYIPKTWY-FVGGLSISGLSLALLPFAWTYSSVCFWCALFGLASGIYVGIT 566
            :..| :.|.......:..:..| |...:.::|||..:.....::.::..:|.|:.:.......:.
 Frog   283 IFMRPMAGLVSQQKVFHGRLMYLFSVAVILNGLSNLVCAIWVSFPALLTYCVLYSITMSFIGSLI 347

  Fly   567 AVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALGLTLLAGA---SL 628
            ..::.|.:|.:|...::|:...:..:..:.||||.....:....|..:|:|..:.:.:..   .|
 Frog   348 FQVLMDTVGMKRFPGAFGLFTILESITIMAGPPLAGLLVDITGQYGLVFYASSIAVTSSGLFMGL 412

  Fly   629 WSFMPWINRRKANA 642
            .||.  ::|.:|.|
 Frog   413 ASFA--VDRSEAKA 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hrmNP_001286141.1 2A0113 49..653 CDD:273325 113/599 (19%)
MFS 59..>234 CDD:119392 51/174 (29%)
MFS <449..633 CDD:119392 32/188 (17%)
slc16a5XP_002940018.3 MFS_MCT6 9..414 CDD:340983 104/580 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D518644at33208
OrthoFinder 1 1.000 - - FOG0000033
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X70
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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