DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and CMD1

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_009667.1 Gene:CMD1 / 852406 SGDID:S000000313 Length:147 Species:Saccharomyces cerevisiae


Alignment Length:145 Identity:43/145 - (29%)
Similarity:86/145 - (59%) Gaps:5/145 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCK 72
            :||:...:.||..||.|..|||..:::::::..||.......|..|:.|:|.....:::||:|..
Yeast     7 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 71

  Fly    73 LAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIEEIDAD 137
            |.:|.::..:.    :.||.|||:|:||.|.|.::.|.|:.:|..:.:||::.::|.::.|: :|
Yeast    72 LMSRQLKSNDS----EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SD 131

  Fly   138 GSGTVDFDEFMQVMT 152
            |||.::..:|..:::
Yeast   132 GSGEINIQQFAALLS 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 43/143 (30%)
CMD1NP_009667.1 PTZ00184 1..145 CDD:185504 43/142 (30%)

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