DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and CAM4

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001185330.1 Gene:CAM4 / 842959 AraportID:AT1G66410 Length:159 Species:Arabidopsis thaliana


Alignment Length:161 Identity:52/161 - (32%)
Similarity:92/161 - (57%) Gaps:15/161 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADGEYDKEQLRILRNAFKAFDHDG----------AGSIEHADVSSILEILGQKLEPPAVKALIK 55
            ||| :...||:...:.||..||.||          .|.|...::.:::..|||......::.:|.
plant     1 MAD-QLTDEQISEFKEAFSLFDKDGDDSISDSGDSCGCITTKELGTVMRSLGQNPTEAELQDMIN 64

  Fly    56 EVDKGTTGKLDFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDD 120
            |||....|.:||.:|..|.|:.::..:.    :.||||||||:||:..|:::.|.||.::..|.:
plant    65 EVDADGNGTIDFPEFLNLMAKKMKDTDS----EEELKEAFRVFDKDQNGFISAAELRHVMTNLGE 125

  Fly   121 KLSNQDLDMIIEEIDADGSGTVDFDEFMQVM 151
            ||::::::.:|.|.|.||.|.::::||:::|
plant   126 KLTDEEVEEMIREADVDGDGQINYEEFVKIM 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 52/161 (32%)
CAM4NP_001185330.1 PTZ00184 1..159 CDD:185504 52/161 (32%)

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