DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and AT1G12310

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_172695.1 Gene:AT1G12310 / 837785 AraportID:AT1G12310 Length:148 Species:Arabidopsis thaliana


Alignment Length:149 Identity:46/149 - (30%)
Similarity:81/149 - (54%) Gaps:7/149 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDF 67
            ||..| :|:..::.||..||.||.|.|..:::..::..||.......:|::|  ..:..:...||
plant     4 DGLSD-DQVSSMKEAFMLFDTDGDGKIAPSELGILMRSLGGNPTQAQLKSII--ASENLSSPFDF 65

  Fly    68 SQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIE 132
            ::|..|.|:.::.|    ....:|::||:|.||||.|::.||.||.||..:.:||...:.|..|:
plant    66 NRFLDLMAKHLKTE----PFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNEFDEWIK 126

  Fly   133 EIDADGSGTVDFDEFMQVM 151
            |:|....|.:.:::|:..|
plant   127 EVDVGSDGKIRYEDFIARM 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 46/149 (31%)
AT1G12310NP_172695.1 PTZ00184 4..148 CDD:185504 46/149 (31%)

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