DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and CAM1

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001154755.1 Gene:CAM1 / 833756 AraportID:AT5G37780 Length:175 Species:Arabidopsis thaliana


Alignment Length:177 Identity:52/177 - (29%)
Similarity:92/177 - (51%) Gaps:31/177 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADGEYDKEQLRILRNAFKAFDHDG--------------------------AGSIEHADVSSILE 39
            ||| :...||:...:.||..||.||                          .|.|...::.:::.
plant     1 MAD-QLTDEQISEFKEAFSLFDKDGDVFVLSDLGFDFKRLSNCLETTPELSHGCITTKELGTVMR 64

  Fly    40 ILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKG 104
            .|||......::.:|.|||....|.:||.:|..|.|:.::..:.    :.||||||||:||:..|
plant    65 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDS----EEELKEAFRVFDKDQNG 125

  Fly   105 YLTVATLRGILHELDDKLSNQDLDMIIEEIDADGSGTVDFDEFMQVM 151
            :::.|.||.::..|.:||::::::.:|.|.|.||.|.::::||:::|
plant   126 FISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVKIM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 52/177 (29%)
CAM1NP_001154755.1 PTZ00184 1..175 CDD:185504 52/177 (29%)

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