DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and CAM6

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_850860.1 Gene:CAM6 / 832245 AraportID:AT5G21274 Length:149 Species:Arabidopsis thaliana


Alignment Length:151 Identity:55/151 - (36%)
Similarity:92/151 - (60%) Gaps:5/151 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADGEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKL 65
            ||| :...:|:...:.||..||.||.|.|...::.:::..|||......::.:|.|||....|.:
plant     1 MAD-QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

  Fly    66 DFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMI 130
            ||.:|..|.||.::..:.    :.||||||||:||:..|:::.|.||.::..|.:|||::::|.:
plant    65 DFPEFLNLMARKMKDTDS----EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVDEM 125

  Fly   131 IEEIDADGSGTVDFDEFMQVM 151
            |.|.|.||.|.::::||::||
plant   126 IREADVDGDGQINYEEFVKVM 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 55/151 (36%)
CAM6NP_850860.1 PTZ00184 1..149 CDD:185504 55/151 (36%)

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