DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC4 and CAM5

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_850097.1 Gene:CAM5 / 817245 AraportID:AT2G27030 Length:181 Species:Arabidopsis thaliana


Alignment Length:151 Identity:54/151 - (35%)
Similarity:93/151 - (61%) Gaps:5/151 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADGEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKL 65
            ||| :...:|:...:.||..||.||.|.|...::.:::..|||......::.:|.|||....|.:
plant     1 MAD-QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

  Fly    66 DFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMI 130
            ||.:|..|.||.::..:.    :.||||||||:||:..|:::.|.||.::..|.:||:::::|.:
plant    65 DFPEFLNLMARKMKDTDS----EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEM 125

  Fly   131 IEEIDADGSGTVDFDEFMQVM 151
            |:|.|.||.|.::::||::||
plant   126 IKEADVDGDGQINYEEFVKVM 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 54/151 (36%)
CAM5NP_850097.1 PTZ00184 1..149 CDD:185504 54/151 (36%)

Return to query results.
Submit another query.