DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC4 and CALM3

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_005175.2 Gene:CALM3 / 808 HGNCID:1449 Length:149 Species:Homo sapiens


Alignment Length:152 Identity:56/152 - (36%)
Similarity:96/152 - (63%) Gaps:5/152 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADGEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKL 65
            ||| :..:||:...:.||..||.||.|:|...::.:::..|||......::.:|.|||....|.:
Human     1 MAD-QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64

  Fly    66 DFSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMI 130
            ||.:|..:.||.::..:.    :.|::|||||:||:|.||::.|.||.::..|.:||:::::|.:
Human    65 DFPEFLTMMARKMKDTDS----EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 125

  Fly   131 IEEIDADGSGTVDFDEFMQVMT 152
            |.|.|.||.|.|:::||:|:||
Human   126 IREADIDGDGQVNYEEFVQMMT 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 54/150 (36%)
CALM3NP_005175.2 PTZ00184 1..149 CDD:185504 56/152 (37%)
Necessary and sufficient for interaction with PCP4. /evidence=ECO:0000269|PubMed:27876793 77..149 30/75 (40%)

Return to query results.
Submit another query.