DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and cabp4

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_021334000.1 Gene:cabp4 / 797905 ZFINID:ZDB-GENE-081104-291 Length:268 Species:Danio rerio


Alignment Length:147 Identity:47/147 - (31%)
Similarity:76/147 - (51%) Gaps:5/147 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQFCKL 73
            |:|..|..|||.||:|..|.:.:.||:..:..:|.......:..:|:::.....|.:||..||:|
Zfish   122 EELDELLEAFKEFDYDQDGYLHYKDVADCMRTMGYMPTEMELIEIIQQIKMKWGGHVDFDDFCEL 186

  Fly    74 AA--RFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHE-LDDKLSNQDLDMIIEEID 135
            ..  ...|....||.  .||..||:.:|.:|.|.:|...|:..... |.:||...:|:.|:.:||
Zfish   187 MGPRMLAETAHMVGL--RELHCAFKQFDCDGDGRITFEELKESTKTLLGEKLKKGELEEILTDID 249

  Fly   136 ADGSGTVDFDEFMQVMT 152
            .:|.|.||||||:.:::
Zfish   250 LNGDGNVDFDEFVMMLS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 47/145 (32%)
cabp4XP_021334000.1 PTZ00184 130..265 CDD:185504 44/136 (32%)

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