DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC4 and cetn4

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_002667227.2 Gene:cetn4 / 795310 ZFINID:ZDB-GENE-030826-21 Length:171 Species:Danio rerio


Alignment Length:147 Identity:41/147 - (27%)
Similarity:86/147 - (58%) Gaps:4/147 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQ 69
            |..:||.:.::.||..||.||:|:|:..::...:..||.:.:...:|.:|.::||..:|.:.||.
Zfish    23 ELTEEQKQEIKEAFDLFDTDGSGTIDVKELKVAMRALGFEPKKEEIKKMIADIDKEGSGVIGFSD 87

  Fly    70 FCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIEEI 134
            |..:..:.:..::.    :.|:.:|||::|.:..|.::...|:.:..||.:.|::::|..:|:|.
Zfish    88 FLSMMTQKMSEKDS----KEEILKAFRLFDDDCTGKISFKNLKRVAKELGENLTDEELQEMIDEA 148

  Fly   135 DADGSGTVDFDEFMQVM 151
            |.||.|.::..||:::|
Zfish   149 DRDGDGEINEQEFLRIM 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 41/147 (28%)
cetn4XP_002667227.2 PTZ00183 15..171 CDD:185503 41/147 (28%)

Return to query results.
Submit another query.