DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and Calml4

DIOPT Version :9

Sequence 1:NP_001163055.1 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_612177.1 Gene:Calml4 / 75600 MGIID:1922850 Length:153 Species:Mus musculus


Alignment Length:147 Identity:42/147 - (28%)
Similarity:77/147 - (52%) Gaps:8/147 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKE--VDKGTTGKLDFSQF 70
            ::|:...:..|..:|....|.|:..|:...:..||....|..|:..::.  :||  .|:||||.|
Mouse     7 QDQINEYKECFSLYDKQQRGKIKATDLLVSMRCLGASPTPGEVQRHLQTHGIDK--NGELDFSTF 69

  Fly    71 CKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMIIEEID 135
            ..:....|:.|:.    :.|:..|..:.|||.|||:..:.||..|.:|.:||:::::|.:.:|..
Mouse    70 LTIMHMQIKQEDP----KKEILLAMLMADKEKKGYIMASELRSKLMKLGEKLTHKEVDDLFKEAG 130

  Fly   136 ADGSGTVDFDEFMQVMT 152
            .:.:|.|.:|.|:|.:|
Mouse   131 IEPNGQVKYDTFIQRIT 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_001163055.1 PTZ00184 1..152 CDD:185504 41/145 (28%)
EFh 14..75 CDD:238008 17/62 (27%)
EFh 90..152 CDD:238008 21/61 (34%)
Calml4NP_612177.1 PTZ00184 1..144 CDD:185504 40/142 (28%)
EFh 12..74 CDD:238008 17/63 (27%)
EFh 94..147 CDD:298682 19/52 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23050
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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