DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC4 and mylz3

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_571694.1 Gene:mylz3 / 58143 ZFINID:ZDB-GENE-000322-6 Length:151 Species:Danio rerio


Alignment Length:148 Identity:40/148 - (27%)
Similarity:73/148 - (49%) Gaps:6/148 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKE--VDKGTTGKLD 66
            ||:..:|:...:.||..||..|...:.:..|:.|:..|||......||.::.:  .|.....::|
Zfish     3 GEFTADQIEDFKEAFGLFDRVGDSKVAYNQVADIMRALGQNPTNKDVKKILGDPSADDMANKRID 67

  Fly    67 FSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMII 131
            |..|..:..   .|:.:.....::..|..||:||||.|.:..|.||.:|..|.:|:|..::|.::
Zfish    68 FEAFLPMLK---TVDANQKGTYDDYVEGLRVFDKEGNGTVMGAELRIVLSTLGEKMSEPEIDALM 129

  Fly   132 EEIDADGSGTVDFDEFMQ 149
            :. ..|.:|.|.::.|::
Zfish   130 QG-QEDENGMVHYEAFVK 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 40/148 (27%)
mylz3NP_571694.1 PTZ00184 1..150 CDD:185504 40/148 (27%)

Return to query results.
Submit another query.