DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and mylz3

DIOPT Version :9

Sequence 1:NP_001163055.1 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_571694.1 Gene:mylz3 / 58143 ZFINID:ZDB-GENE-000322-6 Length:151 Species:Danio rerio


Alignment Length:148 Identity:40/148 - (27%)
Similarity:73/148 - (49%) Gaps:6/148 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKE--VDKGTTGKLD 66
            ||:..:|:...:.||..||..|...:.:..|:.|:..|||......||.::.:  .|.....::|
Zfish     3 GEFTADQIEDFKEAFGLFDRVGDSKVAYNQVADIMRALGQNPTNKDVKKILGDPSADDMANKRID 67

  Fly    67 FSQFCKLAARFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHELDDKLSNQDLDMII 131
            |..|..:..   .|:.:.....::..|..||:||||.|.:..|.||.:|..|.:|:|..::|.::
Zfish    68 FEAFLPMLK---TVDANQKGTYDDYVEGLRVFDKEGNGTVMGAELRIVLSTLGEKMSEPEIDALM 129

  Fly   132 EEIDADGSGTVDFDEFMQ 149
            :. ..|.:|.|.::.|::
Zfish   130 QG-QEDENGMVHYEAFVK 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_001163055.1 PTZ00184 1..152 CDD:185504 40/148 (27%)
EFh 14..75 CDD:238008 16/62 (26%)
EFh 90..152 CDD:238008 20/60 (33%)
mylz3NP_571694.1 PTZ00184 1..150 CDD:185504 40/148 (27%)
EFh 12..76 CDD:298682 16/63 (25%)
EFh 94..146 CDD:238008 19/52 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1470794at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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