DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and cabp2b

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_021336936.1 Gene:cabp2b / 559616 ZFINID:ZDB-GENE-081028-55 Length:262 Species:Danio rerio


Alignment Length:153 Identity:50/153 - (32%)
Similarity:83/153 - (54%) Gaps:9/153 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DGEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDF 67
            |.|...|::..||.|||.||.: .|.|...|:...:..:|..   |....||:.....|.||:||
Zfish   115 DRELRPEEIEELREAFKEFDRN-KGYINCRDLGECMRTMGYM---PTEMELIELSQTITGGKIDF 175

  Fly    68 SQFCKLAA--RFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHEL-DDKLSNQDLDM 129
            ..|.:|..  ...|..:.:|.  .||::||:.:|..|.|.::|..||..:.:| .::|:::|:|.
Zfish   176 EDFVELMGPKMLAETADMIGV--KELRDAFKEFDSNGDGQISVTELREAMKKLMGEQLNSRDIDD 238

  Fly   130 IIEEIDADGSGTVDFDEFMQVMT 152
            |:.:.|.:|.|.|||:||:::|:
Zfish   239 ILRDADLNGDGLVDFEEFVRMMS 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 49/151 (32%)
cabp2bXP_021336936.1 PTZ00184 117..260 CDD:185504 48/148 (32%)

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