DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and cabp5b

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_001018568.1 Gene:cabp5b / 553766 ZFINID:ZDB-GENE-050522-146 Length:169 Species:Danio rerio


Alignment Length:154 Identity:48/154 - (31%)
Similarity:84/154 - (54%) Gaps:8/154 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADGEYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKL 65
            :||.|.|:     ||.||..||.|..|.|...|:.:::..:|.......:..|.:.::....|.:
Zfish    20 LADEEIDE-----LREAFTEFDKDKDGLISCKDLGNLMRTMGYMPTEMELIELSQNINMNLGGSV 79

  Fly    66 DFSQFCKLAARFIEVEEDVGALQ-NELKEAFRVYDKEGKGYLTVATLR-GILHELDDKLSNQDLD 128
            ||..|..|.|..: :.|..|.:. .|||:||:.:|.:|.|.:|...|| .:|..|.:..:.::::
Zfish    80 DFQDFVDLMAPKL-LAETAGMIGIKELKDAFKEFDMDGDGSITTEELRLAMLKLLGENTNRREVE 143

  Fly   129 MIIEEIDADGSGTVDFDEFMQVMT 152
            .::.|:|.:|.|||||:||:::|:
Zfish   144 AVVREVDNNGDGTVDFEEFVKMMS 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 47/152 (31%)
cabp5bNP_001018568.1 PTZ00184 20..166 CDD:185504 47/151 (31%)

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