DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC4 and Cabp2

DIOPT Version :10

Sequence 1:NP_610173.2 Gene:TpnC4 / 35498 FlyBaseID:FBgn0033027 Length:153 Species:Drosophila melanogaster
Sequence 2:XP_574595.3 Gene:Cabp2 / 499298 RGDID:1563670 Length:221 Species:Rattus norvegicus


Alignment Length:151 Identity:50/151 - (33%)
Similarity:85/151 - (56%) Gaps:8/151 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EYDKEQLRILRNAFKAFDHDGAGSIEHADVSSILEILGQKLEPPAVKALIKEVDKGTTGKLDFSQ 69
            |...|::..|:.||:.||.|..|.|.:.::.:.:..||..   |....||:...:.:.||:||..
  Rat    75 ELRPEEIEELQVAFQEFDRDRDGYIGYRELGACMRTLGYM---PTEMELIEISQQISGGKVDFED 136

  Fly    70 FCKLAA--RFIEVEEDVGALQNELKEAFRVYDKEGKGYLTVATLRGILHE-LDDKLSNQDLDMII 131
            |.:|..  ...|..:.:|.  .||::|||.:|..|.|.::|..||..|.. |.::||.:::|.|:
  Rat   137 FVELMGPKLLAETADMIGV--RELRDAFREFDTNGDGCISVGELRAALKALLGERLSQREVDEIL 199

  Fly   132 EEIDADGSGTVDFDEFMQVMT 152
            ::||.:|.|.|||:||:::|:
  Rat   200 QDIDLNGDGLVDFEEFVRMMS 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC4NP_610173.2 PTZ00184 1..152 CDD:185504 49/149 (33%)
Cabp2XP_574595.3 PTZ00184 75..219 CDD:185504 49/148 (33%)

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